ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RifSed_csp2_16ft_3_scaffold_3935_12

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(8123..9004)

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional protein FolD Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYF2_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 283.0
  • Bit_score: 364
  • Evalue 9.80e-98
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 283.0
  • Bit_score: 364
  • Evalue 2.80e-98
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 286.0
  • Bit_score: 503
  • Evalue 1.90e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 882
ATGCAGGAGCTTCCCGAGGTCACAGATCCTCGAGTAATAGACGGCAGGAAAATCGCGCAGGATATCGAGGCAGATGTAAGGAAAGATGTCGAAAATTTCGTGAAAGAGCATGATATCAAGCCTGCTCTAGCAACTATACTCGTGGGAGAGCATCCTCCCTCAAAACTCTATGTCAAGCTCAAGCACTGGGCATGCAAACGTGTGGGCATAGTATCTGAGGATCACAAGTTCCCGCAGGAGACAGGGCAGGAAGAGATAATTGAATTGATCGAGAGGCTCAACAAGAGAACTGAGATACACGGGATCCTGGTGCAGTTACCCCTGCCAAAGCATATCGACGAGCGCGAAGTGATGATGCACATCGCACCTGAGAAAGACGTGGACGGCTTTAATCCTCTCAACATGGGAAAAATGCTGATCGGCCGTGAAGGGCTTGTGCCATGCACGCCAAAAGGTATTATCCTTGCCCTTGAGCATTTCGATATAGACCCGCAGGGCATGGAAGTGGTCGTGGTAGGTCACAGCAATGTTGTTGGAAAGCCCGCTGCCATCATGCTCCTGAACCGCAACGCCACTGTGAAAGTATGCCATGTATATACCAGAGACCTCAGGAGCCACACAAAAGAGGCTGACATCCTCATCGTTGCAACAGGGGTGCGAGGGCTGATAAAAGCCGAAATGGTCAAGCAGGGTGCGATAGTGTTCGATGTAGGGATAACATGGATGGACGAAAGGGTATACGGAGATGTGGATTTCGAAAATGTTCTGCCAAAGGTGAAATTGATATCGCCTGTGCCTGGAGGCGTAGGTCCCATGACCATAGCGATCCTGATGGAGCATACGCTGATGGCTGCGAAGATGCAGGTATCTTATAAGCACTGA
PROTEIN sequence
Length: 294
MQELPEVTDPRVIDGRKIAQDIEADVRKDVENFVKEHDIKPALATILVGEHPPSKLYVKLKHWACKRVGIVSEDHKFPQETGQEEIIELIERLNKRTEIHGILVQLPLPKHIDEREVMMHIAPEKDVDGFNPLNMGKMLIGREGLVPCTPKGIILALEHFDIDPQGMEVVVVGHSNVVGKPAAIMLLNRNATVKVCHVYTRDLRSHTKEADILIVATGVRGLIKAEMVKQGAIVFDVGITWMDERVYGDVDFENVLPKVKLISPVPGGVGPMTIAILMEHTLMAAKMQVSYKH*