ggKbase home page

RifSed_csp2_16ft_3_scaffold_4451_1

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 3..1616

Top 3 Functional Annotations

Value Algorithm Source
Lhr-like helicase {ECO:0000313|EMBL:KCZ73273.1}; EC=3.6.4.- {ECO:0000313|EMBL:KCZ73273.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 537.0
  • Bit_score: 849
  • Evalue 1.50e-243
Lhr-like helicase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KV59_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 538.0
  • Bit_score: 658
  • Evalue 3.50e-186
Lhr-like helicase similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 538.0
  • Bit_score: 658
  • Evalue 1.00e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1614
GCAGGGATGGCGCTTGATTTCAGGGAGGCATCAATTGAAAAGCTTTATTCGATCGTCAGGAGAGCCTATCCTTTCCGCGATTTGAAATTCGAATTGATGCGCGACGTTATAAATCAGCTGGGCGAGAACAGGCTGATATGGATCGAAGGTGATAGGATCGGCAGGAAGAGAAAGACATTGCAGTATTTCTATGAGAATCTTTCCATGATCCCTGATGAAAAACGTTATGAGATCTTTGATATTGTGAGAAGCAGGATTATTGGAGCGCTCGACGAGGCATTTGTGGTGGATTTTGCCGAGGCAGGGGCAGTATTCATAGCAAAAGGCGAGATGTGGCGAATAGTCGAGATAGTGAATGAAAAAGACATGATAAAGGTTGAGCCGATAACCGATCCTGGAGGAGAGATACCCACCTGGGTAGGTGAGGAGATACCTGTTCCTTATGAGGTGGCACAGGAAGTTGGAACTATAAGAAAACGCATCCTTGAGGAGCTCACGAGTGGAAAGAGCGCTGAGAGGATCGCACGGGATTACGAAAAGGAATATCCTGTGGACACAGAAGCGGCGAGCGAGATAATAGAGCTGATCCAGAAGCAGAGAAACGCAGGGCTTGCAGTGCCGTCGGATGATACCGCTGTTTTAGAACAGGATGAAAGAACAATCGTGATCAATATCTGCTGCGGGCATAAAGTGAACGAAACGCTGGGTAGGGTGCTCACGTCCCTGCTTGCAGCAAGGTTCGGCTCAAGCGTTGCGATGGAGATAGATCCTTACAGGATTAGACTTGAGCTTCCAAGGATGCTGAACATCGAGAGGATAAAAGAACTGCTCCTGACCACGAGTCCTGACCATGTCGAACCTATCATCGAGATGACGCTGAAAAATACCATGCTCCTGAAATGGAAGATGGTGCATGTGGCACGTAAATTCGGAGCCCTGAGCAGGGATGTGGATTATGATCGCATCAGCATGAAAAAACTGCTCGACGTGTTCGAGCACACTCCAATGTATGATGAAGCTGTGCGTGAGATATTCCATGATAAACTCGATATCGAGCGAGCAAGAACGATCCTCAGTGAAATCCAGAGCGGGAAAATGAAGATTATCACCCAGCCATCAAGCCCGATCGGAGAGGCGGGTTTCCTGGGTGGAAGAGAACTGATGGCGCCTGAGAGGGCTGACAGCTCGATAATCATGGCACTGAAGAACAGGATCATGGAGGATCATGTCATCCTCTTCTGCCTGAATTGCAAGAAATGGAAATCGAAGCGAACGGTCAAAGGTGTGCCTGAGCGCCCGGAATGTCCGATATGCGGAAGCAGGCTGATAGCTGCGCTCAAGCCCTGGGAAGAGGAAGAGATAAAGATCGCAAAGAAGCCTGAGAAAGACAAAACAGAAGAGGAAAGGAAGCGAACTGCCCGTGTTTACAGGAATGCGAACATCGTGCTCTCGCACGGAAAAACAGCGGCGATAGCACTTGCTTCAAGGGGTGTGGGACCTGAGACAGCCTCACGGGTGATCGGGAAGCTAAGGGAGGACGAGGAGGAATTTTACAGGGATATCCTGATCGCTGAACGAAATTATGCCAGGACGAAGAGGTTCTGGGATGGATGA
PROTEIN sequence
Length: 538
AGMALDFREASIEKLYSIVRRAYPFRDLKFELMRDVINQLGENRLIWIEGDRIGRKRKTLQYFYENLSMIPDEKRYEIFDIVRSRIIGALDEAFVVDFAEAGAVFIAKGEMWRIVEIVNEKDMIKVEPITDPGGEIPTWVGEEIPVPYEVAQEVGTIRKRILEELTSGKSAERIARDYEKEYPVDTEAASEIIELIQKQRNAGLAVPSDDTAVLEQDERTIVINICCGHKVNETLGRVLTSLLAARFGSSVAMEIDPYRIRLELPRMLNIERIKELLLTTSPDHVEPIIEMTLKNTMLLKWKMVHVARKFGALSRDVDYDRISMKKLLDVFEHTPMYDEAVREIFHDKLDIERARTILSEIQSGKMKIITQPSSPIGEAGFLGGRELMAPERADSSIIMALKNRIMEDHVILFCLNCKKWKSKRTVKGVPERPECPICGSRLIAALKPWEEEEIKIAKKPEKDKTEEERKRTARVYRNANIVLSHGKTAAIALASRGVGPETASRVIGKLREDEEEFYRDILIAERNYARTKRFWDG*