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RifSed_csp2_16ft_3_scaffold_4542_2

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(537..1550)

Top 3 Functional Annotations

Value Algorithm Source
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 337.0
  • Bit_score: 535
  • Evalue 4.00e-149
UPI0003D1B400 related cluster Tax=unknown RepID=UPI0003D1B400 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 338.0
  • Bit_score: 434
  • Evalue 6.80e-119
flap endonuclease-1 similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 338.0
  • Bit_score: 429
  • Evalue 4.70e-118

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1014
ATGGGGGTTGACCTCGGAGACCTTTTTGAGAAAAAGGAAATCACACTATCAGACCTGAAAGGAAAAGCAATAGCCATAGACGCATACAATACCCTCTACCAGTTCCTGAGCATCATACGCCAGCGCGACGGAACCCCGCTTGTTGATTCTCATGGTGAGATCACATCCCATCTTTCAGGATTCCTGTACAGGACAACCAACCTTGTTGAAGAAGGCATCAAACCTGTATTCGTTTTTGACGGAGTGCCGCCTGAGTTCAAGATCACCACCATAGAGGAGCGCCAAAAAATAAGGACAGAAGCAATGGTGAAATGGGAAGAGGCAAAAGCTGCCGGCGATGAGGATGCTTTTAGATTCGCCCAGGCATCATCGCATATCAAGGGGACAATGATAGATGATGCAAAACAGCTGCTCTGGTCAATGGGGATGCCTGTGGTTCAGGCGCCTTCTGAAGGAGAGGCGCAGGCTGCGTTCATGGTAAGGAAAGGGGATGCCTATGCGGTCGGCTCCCAGGACTACGATGCCCTTCTTTTCGGTTCCCTGGTCGTGGTCAGGAACCTTGCGGTCTCAGGTAAAAGGAAGCTCCCGGGAAAAGGGATATATGTGGACGTGAAGCCTGAACTCATAGAGTTTGAGAAAGGTCTCTTCGGGCTTGAGATAACAAAAGAGCAGCTTGTAGATATCGCGCTCCTAGTGGGAACTGATTATAATGAAGGCATCAAAGGAATAGGTCCAAAGAAAGCACTCAAATTAATAAAAAAGCACGGACATATCGAAGGGGTGCTGAAAGAGCTTGGCACAGATATCAAATACCTTGCAGAGATAAGGGATCTGTTCCTGAACCCGGACGCGACGCCAGATTATGAGATGAAGTGGAAAAAGCCTGATCCGGATGCGATAGTAAGATTCCTCTGCACAGAGCATGATTTCTCGGAAGAAAGGGTATCAAAAGCAGTGGAGCGCCTGCTTGCGGCTTCCGAAAAAGGACAGCAGACGCTGGACAGGTGGTTTTAG
PROTEIN sequence
Length: 338
MGVDLGDLFEKKEITLSDLKGKAIAIDAYNTLYQFLSIIRQRDGTPLVDSHGEITSHLSGFLYRTTNLVEEGIKPVFVFDGVPPEFKITTIEERQKIRTEAMVKWEEAKAAGDEDAFRFAQASSHIKGTMIDDAKQLLWSMGMPVVQAPSEGEAQAAFMVRKGDAYAVGSQDYDALLFGSLVVVRNLAVSGKRKLPGKGIYVDVKPELIEFEKGLFGLEITKEQLVDIALLVGTDYNEGIKGIGPKKALKLIKKHGHIEGVLKELGTDIKYLAEIRDLFLNPDATPDYEMKWKKPDPDAIVRFLCTEHDFSEERVSKAVERLLAASEKGQQTLDRWF*