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RifSed_csp2_16ft_3_scaffold_4822_18

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(15036..15560)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 174.0
  • Bit_score: 300
  • Evalue 8.50e-79
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 158.0
  • Bit_score: 250
  • Evalue 2.00e-64
3-isopropylmalate dehydratase small subunit Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=LEUD_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 158.0
  • Bit_score: 250
  • Evalue 7.20e-64

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 525
ATGGAGCAGAAACTCACGGTGAATCTTGAAACAGATCTGAAGCCGCCTTCAAATGTGTGGAAGTTCGGCGACGACATAGATACGGATGCCATAATACCTGGAAAGTATCTCACGATCAACAATCCAAAGGAGCTTGCAAAGCATGCATTTGAAGGAGTGCGCCCTGAGTTCGCACGCAATGTCAGGGATGGGGATATCATTGTCGCAGGTTTCAATTTCGGATGCGGCTCATCGCGCGAACATGCGCCCCTTGCGCTAAAAGGATCAAAGGTCAAATGCATAATCGCGAAATCCTTTGCCAGGATCTTTTTCAGGAACGCCATAAATATCGGGCTTCCGCTTCTTGAATGCCCTGATACTGACAGGATCGAAGAAGGGGACTATATAGAAGTGGACTTTGAATCAGGAATAATCGCCAACGCTTCAAAGAAGCAGACCTATAACGCAACGCCTCTTCCAGATTTCGTGCGCGGGATCGTGGAAGAAGGCGGACTTATAGCATATGCAAAAAAAATAATAAAATAA
PROTEIN sequence
Length: 175
MEQKLTVNLETDLKPPSNVWKFGDDIDTDAIIPGKYLTINNPKELAKHAFEGVRPEFARNVRDGDIIVAGFNFGCGSSREHAPLALKGSKVKCIIAKSFARIFFRNAINIGLPLLECPDTDRIEEGDYIEVDFESGIIANASKKQTYNATPLPDFVRGIVEEGGLIAYAKKIIK*