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RifSed_csp2_16ft_3_scaffold_4833_15

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(10536..10748)

Top 3 Functional Annotations

Value Algorithm Source
TRAM-domain protein Tax=Methanolobus psychrophilus R15 RepID=K4MJA4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 69.0
  • Bit_score: 98
  • Evalue 1.80e-18
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:KCZ71833.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 70.0
  • Bit_score: 117
  • Evalue 4.10e-24
TRAM-domain protein similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 69.0
  • Bit_score: 98
  • Evalue 5.20e-19

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 213
TTGTTTAATGAACAAGATGAAAAAGCTCCTGTTTCAGCGGGCTCTGTCCACGATGTTACGATCGAGGGCATTGCCAGGGAAGGAGATGGAATAGCGCGTGTTAAGGGTTTTGTGATTTTTGTGCCCGGGACTAAAGTCGGAGACAATGTCACGATCAAGATTGAGCGGGTAATGCGAAAATTCGCAATTGGGGCCCTTGCCGAAAAGAACTAA
PROTEIN sequence
Length: 71
LFNEQDEKAPVSAGSVHDVTIEGIAREGDGIARVKGFVIFVPGTKVGDNVTIKIERVMRKFAIGALAEKN*