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RifSed_csp2_16ft_3_scaffold_5082_16

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(8735..9484)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGN5_METFS similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 249.0
  • Bit_score: 373
  • Evalue 1.10e-100
CRISPR-associated endonuclease Cas1 similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 249.0
  • Bit_score: 373
  • Evalue 3.00e-101
Tax=RBG_16_OP11_Levybacteria_35_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 249.0
  • Bit_score: 468
  • Evalue 4.40e-129

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Taxonomy

RBG_16_OP11_Levybacteria_35_11_curated → Levybacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 750
GTGTGGCATTCAAAGCTGGGAAGCACCACACTGATACGGCGCAGGCAGCTTGAGGCTGAAGCCTCTGCAGTGGGGTTCAATCTGGCGCGCGGCTGGATAGCGCAGAAAATTGAGAACCAGCTTGATTTCCTCAAAGACCTGAAAAAGAACCGTCCCGATGATTATGATACACTTGCGCCGTATATTGCTAAGATTGCGCAATTGAATGAAGACCTTATGAGCATGAAGGGTTCGCTCGATGAGAAGCGTGGTTCGATAATGGGGATTGAGGGTATGGCCTCGCTTACTTATTTTGAAGCACTGAACAGCATCATGCCCGATGCCTGGAAGTTCAACGGCAGGAGCCGCGACCCTGCGAAAGATGCCTTTAATTGCCTGCTCAACTACGGCTACGGAGTTCTTTACTCACAGGTCGAGAAAGCCTGCATCATTGCAGGACTTGATCCATATATGGGGTTTCTGCATACTGATAATTACAATAAGAAGTCGTTTGTGTTCGATCTGATAGAGATATTCAGGATACATATAGACAGGACAGTTGTGAACCTTTTCTCGAAAAAGCAGGTACATGAGGGCTTGTTTGACAAAATCCCGGGTGGTCTGTACCTGAACAAAGAAGGTAAAGCCGTATTGATCTCAGCGGTCAACGAGACCCTTGATAAAGAAATCGATTACAACGGGCGCAATGTGAAGATAAGGAACACTATCCAGATGGAATCTCACAGCATAGCGAATGGTTTAATAAAATAG
PROTEIN sequence
Length: 250
VWHSKLGSTTLIRRRQLEAEASAVGFNLARGWIAQKIENQLDFLKDLKKNRPDDYDTLAPYIAKIAQLNEDLMSMKGSLDEKRGSIMGIEGMASLTYFEALNSIMPDAWKFNGRSRDPAKDAFNCLLNYGYGVLYSQVEKACIIAGLDPYMGFLHTDNYNKKSFVFDLIEIFRIHIDRTVVNLFSKKQVHEGLFDKIPGGLYLNKEGKAVLISAVNETLDKEIDYNGRNVKIRNTIQMESHSIANGLIK*