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RifSed_csp2_16ft_3_scaffold_5082_24

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(12386..15127)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEM1_METFS similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 756.0
  • Bit_score: 754
  • Evalue 8.00e-215
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 756.0
  • Bit_score: 754
  • Evalue 2.30e-215
Tax=Altiarchaeum hamiconexum similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 732.0
  • Bit_score: 819
  • Evalue 3.70e-234

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Taxonomy

Altiarchaeum hamiconexum → Altiarchaeum → Altiarchaeales → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2742
ATGAAAGAGTTTTTTTCGCACCTAAACCCAGATATTCGATTGAAAGACCATCTTCAAATAGTTGGAGAAAATGGAAAAAAAATATTACTTGAGAAGCAACTTAATAATTTAGACAAAAATCTTTTATCAGATATTGCATATCTCGTCGGAATTTCACATGATTTTGGAAAATTTACACAATATTTCCAAGATTACCTATATGGAAGAACATCCGAAAGTGGATGGACTCATCATGGATTAATTTCTGCACTTTTCACGTTTGAGGTGTTATCAGAGTTTGTTAGAATTAAAAATGCCGAAGATCATAAGATTCATAATTATCTCCCCCTTTTTGGTTATTTTATTGTAAAGCATCATCATGGCAATTTGAATGACATTAACAGTGATGTAGAATCAAAAGATTTAATTAAAGAATTCAATTTTATCAGAGAACAACTTTTGAGTATAAAGAAATCTGAGAAAGAAATTGAAGAAATATATAACGGCCTTTTTCAAGGCTATGGATTGAATTTTCCACGTATTATAAGCAATTTATACCGTTATGGATCCCCATTTGCGAGTTTTCAAGAATTAGATAAAATAATAAAACCATTAAGAAAATTGAACTACGAATTTACAGACAGCAACTCAAAAAAGGAGAATAGAGAGATAAGTTTTTTTTTAATTACCTTATTGCTCTATTCAATCTTAATTGATTCTGATAAAAAACACGCCGGTGATGTCAGAAAAATAGAAAGAAAAGAGCTCTTAGATAATCTCGTTGAAACACATTTAAACAAACCTAAAATCAAAGAAGAAAACAAGAGCAATATTAACATTATTAGGTCTCAGATTCAAGAATCAGTAATAAAGAATATCTCTGACCCTAAAAATGCAAGTCAGAAAATTTTTACGCTGACAGCACCGACTGGAACAGGTAAAACATTAACTTCTTTCGCTGCTGCATTAAAGCTAAGAAAAATCTTAAAGAATAGTTTCGATTTAGAATATGAACCAAGGATTATCTACTCACTGCCTTTTACAAGTATTATAGACCAAAACTATGATGTGTTCGATAAAGTTTTAAGTCAAATTGGCGATTTCAAAAATAACGAGAGTCCATATCTTTTAAAACATCATCATCTCTCAGAAATCTTTTATAAAACGCAAAATATGGATAAAGAAGAAGATTTGGATGAAAGCCTTGCCTTAATTGAATCTTGGGAATCTGAAGTTATCGTTACGACTTTTATTCAATTATTTTATAGCCTGATAGGATACAAGAATAGAAGCTTAAAGAAGTTTCACAACACTGTAAATTCAATAATTATTTTAGATGAAGCCCAGAATATTCCTATAGAGTACTGGAATTTAGTGAGAAGAGTTCTAATTGGGATGACAGAATATTTTAATTGTAGAATTATTTTAATGACCGCTACCAAGCCATTAATTTTTGAAAGGGGAGAATATAAAGAACTTGTAGATAATTATGAAAGTTACTTTAAGACGGAAGATTTAAACCGCGTAATTTTGAAGATAGATTCCAAAGAGAAAAAAGTAATAGAATTCTGTAACGAGTTGAATGATTGGTCTAAAAACTCATATCTGTTTGTTTTTAATACAATTGGTTCATCATTAGAGTTTTATAATTTAATAACTGATAAAATCCAAAAATCAGGTTTGCCTTTCAAAAAATGCTATTTATCAACAAATATTACTCCAAGAGAAAGAAGGCAAAGAATAGAATACGCAAGAAAAGCGATAAAAAACAATCAAAAGGTCATAATTGTTTCAACACAACTAATTGAAGCGGGAGTAGATATTGACTGTGATTGTGTATATCGTGATAGAGGTCCGTTAGATTCTATAATACAGGTCGCAGGAAGATGCAATAGAAATAAACGGTTCGATAAGGCAGAAATCCATTTAGTGAATTTGAAAAATGGTACCTCGTACACAAGAATATACGATCCTGTTTTATTAGATATAGTTGATAAGTTGTTTAACAATGAAGATAAATACACATCCCAAATCTACGAAATAAATTTCTTAGACTTAATAAATCAATATTTTGAACGTGCAAAAGAAAAATCTGCAACAGAAGTAAAACTTATTGAAGCACTTTACGATTTATATTTTTATGATAAAGATCCTGATAAAAATAAGAGAAGACCAATATCAGATTTCAAATTAATAGATGATAACGACTTTTATAAAGTGGACATTTTTGTTGAGTTAGATGATGAGTTCTTGTTTAGCTGGGATGAAATTCCAGGAAATCACAACGGAAAACTCATAGAAATCTTAAATCAGAATTTTGCTATTGATTGTTTAGAAAAAGCAAAAATAGAAAAAAATGATGATGATAAAACCATAAAATTAACTACTGAAAATAATTCTGTTTTGCTGAAGCTTAACTTTGAAAAAACCAAAGCAACACTAACAATCGATGGAAATGAAGTTGATGAATTCGTTTTGAAGGTTGAGAACGGCAAGTTAAACGTATATGATGATAATGCCAAAAAAGTAAAACAAAAATACTGTGAAATCCGAGACATTAAAGATCCTCTTAAACGAAGAAAAGAATTTTTAAAAATAAAAAAGCAATTTTATGATTATGTAATTAGTATCCCAAAGAATTACGCCGCTCATTTTAAAGAAGAAGAACTTGGCTTTATCAATAATTACGAACTGAAATCTTATTATGATAGCAAAACAGGATTCAAAAGAGAAAAAGCAGGCTGTGGAAATTTAATTTGTTGA
PROTEIN sequence
Length: 914
MKEFFSHLNPDIRLKDHLQIVGENGKKILLEKQLNNLDKNLLSDIAYLVGISHDFGKFTQYFQDYLYGRTSESGWTHHGLISALFTFEVLSEFVRIKNAEDHKIHNYLPLFGYFIVKHHHGNLNDINSDVESKDLIKEFNFIREQLLSIKKSEKEIEEIYNGLFQGYGLNFPRIISNLYRYGSPFASFQELDKIIKPLRKLNYEFTDSNSKKENREISFFLITLLLYSILIDSDKKHAGDVRKIERKELLDNLVETHLNKPKIKEENKSNINIIRSQIQESVIKNISDPKNASQKIFTLTAPTGTGKTLTSFAAALKLRKILKNSFDLEYEPRIIYSLPFTSIIDQNYDVFDKVLSQIGDFKNNESPYLLKHHHLSEIFYKTQNMDKEEDLDESLALIESWESEVIVTTFIQLFYSLIGYKNRSLKKFHNTVNSIIILDEAQNIPIEYWNLVRRVLIGMTEYFNCRIILMTATKPLIFERGEYKELVDNYESYFKTEDLNRVILKIDSKEKKVIEFCNELNDWSKNSYLFVFNTIGSSLEFYNLITDKIQKSGLPFKKCYLSTNITPRERRQRIEYARKAIKNNQKVIIVSTQLIEAGVDIDCDCVYRDRGPLDSIIQVAGRCNRNKRFDKAEIHLVNLKNGTSYTRIYDPVLLDIVDKLFNNEDKYTSQIYEINFLDLINQYFERAKEKSATEVKLIEALYDLYFYDKDPDKNKRRPISDFKLIDDNDFYKVDIFVELDDEFLFSWDEIPGNHNGKLIEILNQNFAIDCLEKAKIEKNDDDKTIKLTTENNSVLLKLNFEKTKATLTIDGNEVDEFVLKVENGKLNVYDDNAKKVKQKYCEIRDIKDPLKRRKEFLKIKKQFYDYVISIPKNYAAHFKEEELGFINNYELKSYYDSKTGFKREKAGCGNLIC*