ggKbase home page

RifSed_csp2_16ft_3_scaffold_5082_26

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(15908..16225)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJD7_METFS similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 84.0
  • Bit_score: 123
  • Evalue 8.00e-26
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 84.0
  • Bit_score: 123
  • Evalue 2.30e-26
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI {ECO:0000313|EMBL:AGB03159.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 84.0
  • Bit_score: 123
  • Evalue 1.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanoregula formicica → Methanoregula → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 318
ATGGCTACTCGAACTAAGATCGGACAATATCCCAGGTTGTATTTAAGAATCGAATATAACTCACCAGAATATTTACTTGGCGATCTAAGAAAATATGTAGCAATTGATTCCGATTCAAAATCCCCAGTTCGATTTGTAACAGATTATAACGTGGATTTATCTGAATTGAAAAAATTTTTAGATAACAACAAAGGTAAAATTCAAAAAGTAAATTGGTGGGTACACAAAGATTTGAAAATAAAAGATGGAAAAGATGGAAATTTAGGTTCTTTATTAGCTGGATTAGAGGGAAAATTGGCCCCGATTATGGTAAGTTAA
PROTEIN sequence
Length: 106
MATRTKIGQYPRLYLRIEYNSPEYLLGDLRKYVAIDSDSKSPVRFVTDYNVDLSELKKFLDNNKGKIQKVNWWVHKDLKIKDGKDGNLGSLLAGLEGKLAPIMVS*