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RifSed_csp2_16ft_3_scaffold_6152_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(6384..7589)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system permease protein (Homolog to LolDCE lipoprotein release factor) Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EQ0_HALWD similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 397.0
  • Bit_score: 250
  • Evalue 2.80e-63
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KCZ72802.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 399.0
  • Bit_score: 451
  • Evalue 6.90e-124
lolE; ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 397.0
  • Bit_score: 250
  • Evalue 8.00e-64

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1206
ATGCTTGCAATAAAAAACCTTGTGAAAAATAAATTCAGGACTGTACTCACGATTCTTGGAATAGCCTTGGCAGTCCTTTCTATTATCCTTCTAGCCTCCACAGGCAACGGACTTTTTACTACAGGAGGGAGGCTGCTGGAGCAAAGTTCGATCCATCTGTGGGTGACAGGTAGCCCTTCAGACATCATGTCCCAGTACACAGGAACCGAGGAATCCAAAATAACGGAAGCGCATAGATTTGCAGAGGATCTCAGGAAAAATAAGGAGATCAATATGATCACGCCCATGCTCACAGAAATGATCTATGCATTCAAGGAAAACTCAGAGCCAAGGGCAGTTTTTGGACTCGGTATTGAAGGGTCGGGAGGAACTATGGTAAGCATCATTCAGGGTGAAGGTCTGACCAGCGATGAACATTTCAATAAAGGCAAATACGACGGCAGATGGAAGAAAGAAGTCCTGATCGACAATAGAACTGCAATCCTTCTGGGTATCAAGGTCGGAGATACCATTCATATGGGCAAGACTCTGAGCGAGGCAAAGGAACAGGAATTCACAGTCATTGGACTGACAAATTCACTTTCCAGGTTCAGCTCAAATCCAATGGTTATCCTTTACCTGTCTGAACTTCAGGACATGACAGGGAACAAATATTATGATAGCGTTACAATGATAGTCCTCAGACTTAAAAATCCTGACATGGCATCTGAGGTCCAGACCGAGTTAAACCAAAAGTATCCCCAGTATACAGTCAGCACAAACCAGGAATATCTGAAAAAAGCTTTGAAGCAAAACAGCCTTCCTTTGGCCAGCGCAGCCTCTATTGTTGTTCTTGCTGTCATAATGGGAACTTTGCTTGCCATGAACACCATGCTGCTCAGCCTTAACGAGAAAAAAAAGGAGATTGCAATCTTACGTGTTATAGGTTTAAGCCGCTGGTCAATATTCAAAAGCATAGGAACAGAGGGGCTTCTGATAAGCGTGGTGGGAGGCGCTGCAGGGATATTTCTCAGCATTCCTATCACAGGTTTACTGAACGGTTTAATATTCGCCTATTTGGGGTTTGATGGACTTGTGGCTCTGCAACCAGATTATATTTATATTGGATTTTCCATTGCAATCATAATAGGCTTTCTCACCAGTATAATTGCTGCAGTTCACATTTGCAGGACGAACCCTGCTGAGTTGCTGAGGGCAGGAATATGA
PROTEIN sequence
Length: 402
MLAIKNLVKNKFRTVLTILGIALAVLSIILLASTGNGLFTTGGRLLEQSSIHLWVTGSPSDIMSQYTGTEESKITEAHRFAEDLRKNKEINMITPMLTEMIYAFKENSEPRAVFGLGIEGSGGTMVSIIQGEGLTSDEHFNKGKYDGRWKKEVLIDNRTAILLGIKVGDTIHMGKTLSEAKEQEFTVIGLTNSLSRFSSNPMVILYLSELQDMTGNKYYDSVTMIVLRLKNPDMASEVQTELNQKYPQYTVSTNQEYLKKALKQNSLPLASAASIVVLAVIMGTLLAMNTMLLSLNEKKKEIAILRVIGLSRWSIFKSIGTEGLLISVVGGAAGIFLSIPITGLLNGLIFAYLGFDGLVALQPDYIYIGFSIAIIIGFLTSIIAAVHICRTNPAELLRAGI*