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RifSed_csp2_16ft_3_scaffold_7931_11

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 13840..14079

Top 3 Functional Annotations

Value Algorithm Source
TPR domain-containing protein (Fragment) Tax=Brachyspira hampsonii 30599 RepID=L8XVB7_9SPIR similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 53
  • Evalue 5.80e-05
TPR domain-containing protein {ECO:0000313|EMBL:ELV06281.1}; Flags: Fragment;; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hampsonii 30599.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 53
  • Evalue 8.20e-05

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Taxonomy

Brachyspira hampsonii → Brachyspira → Brachyspirales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 240
ATGTCCCCGGTTCAAGTCCGGGTCTGGGCATCCAATTCCAGGGTCACAGACCAGCAGCACGAAGGAGCAATATCCTATTATAAGGAGGTAATAAAAAGCGACCCAACATGCACCGATGCATACATGAATATTGGAATCTGTTATGACCTTCTCAGAGATTATTCAAAAGCTATTGATTTTTATGATATGGCGTACAGGGATGCACTGGAATGTTTCACTATGACGCTTGAGATTGACTAA
PROTEIN sequence
Length: 80
MSPVQVRVWASNSRVTDQQHEGAISYYKEVIKSDPTCTDAYMNIGICYDLLRDYSKAIDFYDMAYRDALECFTMTLEID*