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RifSed_csp2_16ft_3_scaffold_10522_9

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(6712..7626)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 304.0
  • Bit_score: 492
  • Evalue 2.70e-136
UPI0003D1BE6F related cluster Tax=unknown RepID=UPI0003D1BE6F similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 305.0
  • Bit_score: 411
  • Evalue 5.60e-112
ribonuclease Z similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 305.0
  • Bit_score: 410
  • Evalue 2.70e-112

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 915
ATGCTTCGTGTGACTTTTCTAGGTACAGGTGGTACTCTGCCCACACCCAGGCGCAATCCTTCTGCGGTACTTATAAACAGGGATGGGGAACTCATGCTATTTGACTGCGGTGAAGGAACACAGCAGCAGATGATGCGCGCAAAAACAGGAATGAAGCTCACCTCCATATTCATCACCCATTTTCACGCAGACCACTTTCTCGGTATCCCTGGACTTATACAGACCCTGTCCTTTAATGGGCGTACAGAACCCCTGGAGATCTATGGTCCGGAATGGACGGAACAGCTTGTAACGCTTTTGATAGAGCTCGGATACTATAAATTAGGATTCGAGATACTTGCACATGAACTGAAGGATGGGGATGTGGTGAACAGAGAAGAATATTCAATAACAGCAGCTGCAACAGACCATGGAATTCCAAGTTTAGGCTATGTCCTGGAAGAAAAAAAGCGCACGGGAAGATTCAACAGAGAGAGGGCTATCGAGCTTGGTATCCCTGTCGGACCTCTTTTCTCAAAACTCCAGAAGGGCGAGCCTGTTAGGCTTGGGGACCGCATAATAAATCCTTCTGACGTAATAGGCCAGGACCGTCCAGGGAGGAAGCTTGTTTACAGCGGAGACACACGACCATGCAGATCCATTGAAAATGCAAGTGCTGGGGCAGATCTCCTCATCCATGACGGGACGCTTGGCGATGAACTTAAAGACTGGGCGGTCGAGACAAAGCACAGCACATCAAAGGAAGCCGCACTTCTTGCACAGAAAGCAAAGGTAAAACAGCTGGTGCTGACCCATATCAGTTCGCGCTACTCTGAGAGCGCTGATCCTCTGCTTCTGGAGGCAAGGAGCATATTTGAGAAGGTGAAAATCGCGGAAGAATTCATGGAAATCGATATTCAGCTCTCTGATAAATAA
PROTEIN sequence
Length: 305
MLRVTFLGTGGTLPTPRRNPSAVLINRDGELMLFDCGEGTQQQMMRAKTGMKLTSIFITHFHADHFLGIPGLIQTLSFNGRTEPLEIYGPEWTEQLVTLLIELGYYKLGFEILAHELKDGDVVNREEYSITAAATDHGIPSLGYVLEEKKRTGRFNRERAIELGIPVGPLFSKLQKGEPVRLGDRIINPSDVIGQDRPGRKLVYSGDTRPCRSIENASAGADLLIHDGTLGDELKDWAVETKHSTSKEAALLAQKAKVKQLVLTHISSRYSESADPLLLEARSIFEKVKIAEEFMEIDIQLSDK*