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RifSed_csp2_16ft_3_scaffold_12182_16

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 10620..11306

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein Mbar_A2303 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y2303_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 228.0
  • Bit_score: 285
  • Evalue 3.40e-74
DNA replication and repair protein RadC {ECO:0000313|EMBL:KCZ72187.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 228.0
  • Bit_score: 346
  • Evalue 2.30e-92
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 228.0
  • Bit_score: 287
  • Evalue 2.60e-75

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 687
ATGCAACAATATAAACTCAGAATCGAAGATATGGCCGCAGAAGAAAGACCGAGCAATAGGTTGATGTCGAACGGCGCAGCATCCTTAAGCAATGCCGAACTCCTGTCGATAATCCTCAAATCGGGCTCGGTCGCTGAGAATGCTATTAACCTGTCCCAGAGAGTCCTATCGCAGTTCGATTTAAAGCAGCTCTCTGCAGTAGATGCGACCCAGCTCATGAAGATCCACGGCATCAAATCCGGCAAGGCTGTCCAGATCGTAGCCTGTTTTGAGCTGGCAAGGAGACTTGAGACGTTTGATGGCCAATCAAAGTTTAAGATCAACTCTCCGGAGGACGTCTACAGGCGACTCTATCCGGCAATGAGGGAATCCAAGAAAGAACATTTTGTCGAGCTGTGCCTGGACACCAAGAACCAGGTGATCAGGGAAGATACCATATCCATTGGTTCGCTCAACGCAAACATAGTCCATCCAAGAGAAGTGTTTCGCACTGCCCTGATCGAGTCGGCAGCACACATTATTGTAGCTCACAATCATCCATCCGGCGATCCTACACCCAGCAGGGAAGATATAGATATCACAAAGAAGCTGGTGGAAACCGGGAAGATAATGGGCATTGATGTTCTCGACCATGTAATAATCGGAGATTGCAGGCATTTCAGCATGAAGGAGGCGGGGCACATATGA
PROTEIN sequence
Length: 229
MQQYKLRIEDMAAEERPSNRLMSNGAASLSNAELLSIILKSGSVAENAINLSQRVLSQFDLKQLSAVDATQLMKIHGIKSGKAVQIVACFELARRLETFDGQSKFKINSPEDVYRRLYPAMRESKKEHFVELCLDTKNQVIREDTISIGSLNANIVHPREVFRTALIESAAHIIVAHNHPSGDPTPSREDIDITKKLVETGKIMGIDVLDHVIIGDCRHFSMKEAGHI*