ggKbase home page

RifSed_csp2_16ft_3_scaffold_19764_2

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(747..1616)

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 289.0
  • Bit_score: 490
  • Evalue 1.30e-135
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5) similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 290.0
  • Bit_score: 359
  • Evalue 5.20e-97
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=uncultured Chloroflexi bacterium RepID=H5SN24_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 284.0
  • Bit_score: 362
  • Evalue 3.70e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 870
TTGGGCATACTCATTAATAAAAACACCAGGGTTCTGGTCCAGGGTATTACAGGGCATGAAGGATCGTTCCATACGGCGCAGATGAAAGAGTTCGGGACAGACGTGGCAGGAGGTGTGACACCCGGTAAAGGGGGAAGCGAGGTTTTCGGCATCCCTGTTTTCGATTCTGTGAAGGAGGCAGTTGAAGAAGTGGATCCTGATGCAACCGTTGTTTTTGTGCCTCCACGATTCACGGCAGACGCCATTTTTGAGGCGATAGACAGCGAAATAGAATTGATCGTATGCATTACAGAAGGGGTTCCTGTGCATGACATGATGCGCATATGTGCCTATCTTGAGGGCTCTTCATCAAGGCTTATCGGTCCGAACTGCCCCGGTATAACGACTCCGGGCGGGTCAAAGGCAGGGATAATGCCAAATCCGATCCATCTTCCAGGGAACATCGGACTTGTATCAAGAAGCGGGACGCTCACCTACGAGATAATAGACCTCTTATCAAAAGGCGGGCTCGGGCAGTCAACCTCGGTCGGCATAGGAGGAGACCCGATCATCGGGACGTCGTTCGTTGAGATTTTGAATTTATTTGAGGAGGATCCCGCGACCCATGCTGTGGTGCTTGTGGGCGAGATCGGTGGAACTGCGGAGCAGGATGCTATTGATTTCATTGAGGCGATGAGCAAACCTGTGATCGCGTATGTTGTAGGGGTCTCGGCACCGCCAGGGAAAACGATGGGGCATGCCGGAGCGATCGTATCAAAGGGCGGCGGCACTGCGCGAGAGAAGATACAGGCATTTGAAAGCGCTGGAATAATGGTGGGGAATAGTCCTGAGGATATAGTCAATAAGTTAAAAAATATTGTCATAATTTAA
PROTEIN sequence
Length: 290
LGILINKNTRVLVQGITGHEGSFHTAQMKEFGTDVAGGVTPGKGGSEVFGIPVFDSVKEAVEEVDPDATVVFVPPRFTADAIFEAIDSEIELIVCITEGVPVHDMMRICAYLEGSSSRLIGPNCPGITTPGGSKAGIMPNPIHLPGNIGLVSRSGTLTYEIIDLLSKGGLGQSTSVGIGGDPIIGTSFVEILNLFEEDPATHAVVLVGEIGGTAEQDAIDFIEAMSKPVIAYVVGVSAPPGKTMGHAGAIVSKGGGTAREKIQAFESAGIMVGNSPEDIVNKLKNIVII*