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RifSed_csp2_16ft_3_scaffold_19764_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 5865..6557

Top 3 Functional Annotations

Value Algorithm Source
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 222.0
  • Bit_score: 332
  • Evalue 2.70e-88
tRNA-modifying enzyme Tax=Methanolobus psychrophilus R15 RepID=K4MCK2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 2.90e-68
tRNA-modifying enzyme similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 8.10e-69

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 693
GTGATCGCTGAAGTTCCCCGGAAGTGGGACGACCCTGAGGTGCTTGTAGAAAGCTGCATTGCAGAACAGCGCAGGCTTGTATCAGGCTATGGAGGCTCTGAATTCATGGACATGACAAAATGGAAAGAGGCATTTGCACCAAAGCATGTTGCCATCTCACTGTCAGGCGAGCCCACCCTTTATCCTTATCTGCCTGAGCTCATAGAGGAGTTCCACAGAAATAACTTTACCACCTTTGTGGTCACAAACGGGACAAACCCTGAAATGGTTGGTGATATCACTCCGACCCAGCTCTATATCAGCCTGAACGCGCCTGATGAAGCGATATATGAAAAGGCATGTGCTCCACTGGGCGATACATGGAAAAACATCATACAGTCTCTTGAAATAATGAAAGATTCTGAATCCAGGAAAGCGATCAGGATTACCCTGACAGAGGGAGTGAATATGATCGCTCCTGGAGATTATGCACAGCTCATAGGGCTAGCCGAGCCTGATTATGTGGAGCTGAAAGCCTATATGCACCTGGGTTTTTCGCGAAAGCGTCTCCTGTCGCAGAACATGCCGTCTCATCAGGAAATAAAGGACTTTTCAAATGAGGTTGCGGATGCTCTGGGTTATCGCATTGCCAGTGAGTCAGAGAAAAGCCGCGTTGTCCTGCTTTCAAAAAACGGAACAATGAGCAGTGTCTAA
PROTEIN sequence
Length: 231
VIAEVPRKWDDPEVLVESCIAEQRRLVSGYGGSEFMDMTKWKEAFAPKHVAISLSGEPTLYPYLPELIEEFHRNNFTTFVVTNGTNPEMVGDITPTQLYISLNAPDEAIYEKACAPLGDTWKNIIQSLEIMKDSESRKAIRITLTEGVNMIAPGDYAQLIGLAEPDYVELKAYMHLGFSRKRLLSQNMPSHQEIKDFSNEVADALGYRIASESEKSRVVLLSKNGTMSSV*