ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RifSed_csp2_16ft_3_scaffold_121334_1

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(1..297)

Top 3 Functional Annotations

Value Algorithm Source
isoprenylcysteine carboxyl methyltransferase bin=bin7_NC10_sister species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 58.0
  • Bit_score: 75
  • Evalue 2.40e-11
putative protein-S-isoprenylcysteine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 58.0
  • Bit_score: 65
  • Evalue 6.90e-09
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 99.0
  • Bit_score: 162
  • Evalue 2.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 297
TTGAAAAAATCTTTTGGCGATCTTATTTCGTTTGGGTTTGTTGCACTCATGATCTTAGTTCTGATCTCAGGTCTTTCAGTTCTTCTTGGCTATGAAAGACCTGAAAATATCGAAGGTGGAGGGCATCATGACCTGACAGGGTACGCTTACGGCAACTGGGTGGCAACCCTGCTCAGCATCGGGCTTTTTTCTATCTTCGCGCTCAGCTTCCTGACCCCGCTGAAAAAGCAGAACTGGAGGACCCTGGGAATATACGAGGCATTCATAATCGCCCTGTTCTCGGAAATGTACGGCTTC
PROTEIN sequence
Length: 99
LKKSFGDLISFGFVALMILVLISGLSVLLGYERPENIEGGGHHDLTGYAYGNWVATLLSIGLFSIFALSFLTPLKKQNWRTLGIYEAFIIALFSEMYGF