ggKbase home page

RifSed_csp2_16ft_3_scaffold_31221_9

Organism: RifSed_csp2_16ft_3_CONCOCT_319

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(5290..7200)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Psychroflexus tropicus RepID=UPI00035F2B17 similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 316.0
  • Bit_score: 109
  • Evalue 9.40e-21
protein with phosphorylated CTD interacting factor 1 WW domain similarity KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 314.0
  • Bit_score: 108
  • Evalue 4.60e-21
Protein with phosphorylated CTD interacting factor 1 WW domain {ECO:0000313|EMBL:AFU67530.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.4
  • Coverage: 314.0
  • Bit_score: 108
  • Evalue 2.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Psychroflexus torquis → Psychroflexus → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1911
ATGTTGCAGGCTTGCGAATTTGTGAGATCGCTCAGGCAAAAGCCAATGATTACCCCCGCAGATTTAGATAAATTTATTTCCATTGTCAATGACCCTGAAAACAGTGAACCTGTTAAAAAAGACACTGCTGAATGGTGCGACGCTCTTATTAAAAATGCGAAATACAACCCAAACAGTCTCTTGTTTAGGGCGTCCTTTTTCGCGATTTCCTCTGTATCGGCAGGGGAGTATTTGAATAATATGATCCACTTGCACAATGGGGCATTTCGCGGGTTGCGACCTATATTTTATGATTATGATTTAACCACCCCCTTTGAAAGGCAAATTTATTATAAAAATTGGAAAGAATTTGCCCCTCAACAGCGGGGCGATACCGCAGTGGCTTTTCAGAAGAATGGAACGAGGGCAACTACGGCTGGATATCTTGAGCATACAAGATACAATAGAGACCTTGTAGGGATAATTGTTGGAAAAGAAGATTGGGGGCATACCGAAATCAATAAAGGGACAGATATTTATAAAAACTGGGTGGATACATCCGAAATATTGAAAATACACATTGATAATAAAACACTCTTTCCCCGTGCGGAAACTCACGTTATTGATTGGGCAGTATTATCCAATAATTACCCTGAGCCAGCCGGTGAATATTTCCCTGCGTCAATAGTAGTGGTGGATTCCCCTGTTAAATATGGAGAATCGGAAACCGCATACTCTGAAAATGGGGCAATTAGGGCTGGATTAGACTCTATGATTATACGAGGTATCACAATAGCAATTGTGGCAAACGTAAAGGGTATCGTTGAAAGGACGAATGCTATACTACAAGAGCCAGTTTTGAATGTTCCTGATGCCCCAGAGAGAGGCCGATATTTCAAATCAGTAATAACTCTGGGGTTTATGTCAGATATTGAACAAGAATATCAACAATACAAATTATCGAATAAACTATTTCAAATTTTTACTGTCGGATTATCAGAGAAATCAAAATACGAAGCTAAAAATATCCTTGAAAGATGGATTTTGAGCCAATATAATGATTATTCATTTCGCCATAAAGAGGGACAAAACCATGTGTTCCCTTTATTCCCATCAACAGATATAAACAGCCCATCGATACGAAAAATGATTAATGAAATTGTTGAAAAAAATATTAGCCCAACAGCACATGTTTTGGTAAATAAATTACTACGTATAATTGAGGAATTCAAAGAATTGCCAGACGACGGAGAATCACGAAAAGTTTCTATTTCTGGGAGAAAAATTATATATGGAGACTACAATGCACTTTTAAATTTACGAATCCAAAAATTACTTGAAACTTTTGGCAATGAGCCGGTAATGAGAATGTTGCTTCGCTATGAGGCGACACAGATGGGATCCCAGCATTGGGGAGCTCCAGAAAAGGTCTATGATTATCTTTATAAAAATTGTGGTGTCCGGAATGAGGCATTTGCAGACCCGTTAAATTCTCGGTTAATGTTTTATCCAGATGGAAAATTCTTTTCCTTGTTTATTGACGTTGATAGAGTATTTGGTAGCAACGGGAATTTTCTAACGGCGGATATTTCTAAATTTTCTGGGGGATTTATGGTTAACCCTCCATATATTGATTCAGTAATGCTTGAAACCGGGAAAAAAGTATCGCATTATCTTGATCATATAAAGGGAAATAATGTAATGTTTATAACGTTCCCATCATGGACTGATTCTGACGCATTTTTATTACTCGAAAGAAGCCCCTGGAAAACGGGACAATATGAACTGAAAAAAGGGGCTCATTATTACACAGATCCGTGTGGGAAAATCATTATATCACGTTTTAATACCACATTATTTATATTGGGTAAAACCGTTCCCAAAGATATTGTTTATGGACTGTTAAAATTATGGAGTCTACAATCAGCATAA
PROTEIN sequence
Length: 637
MLQACEFVRSLRQKPMITPADLDKFISIVNDPENSEPVKKDTAEWCDALIKNAKYNPNSLLFRASFFAISSVSAGEYLNNMIHLHNGAFRGLRPIFYDYDLTTPFERQIYYKNWKEFAPQQRGDTAVAFQKNGTRATTAGYLEHTRYNRDLVGIIVGKEDWGHTEINKGTDIYKNWVDTSEILKIHIDNKTLFPRAETHVIDWAVLSNNYPEPAGEYFPASIVVVDSPVKYGESETAYSENGAIRAGLDSMIIRGITIAIVANVKGIVERTNAILQEPVLNVPDAPERGRYFKSVITLGFMSDIEQEYQQYKLSNKLFQIFTVGLSEKSKYEAKNILERWILSQYNDYSFRHKEGQNHVFPLFPSTDINSPSIRKMINEIVEKNISPTAHVLVNKLLRIIEEFKELPDDGESRKVSISGRKIIYGDYNALLNLRIQKLLETFGNEPVMRMLLRYEATQMGSQHWGAPEKVYDYLYKNCGVRNEAFADPLNSRLMFYPDGKFFSLFIDVDRVFGSNGNFLTADISKFSGGFMVNPPYIDSVMLETGKKVSHYLDHIKGNNVMFITFPSWTDSDAFLLLERSPWKTGQYELKKGAHYYTDPCGKIIISRFNTTLFILGKTVPKDIVYGLLKLWSLQSA*