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BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

09MI20_z3_2014_Nitrospirae_38_1
In projects: 09MI20_z3_2014  |  BJP_Nitrospirae  |  mizunami_genomes

Consensus taxonomy: Nitrospirae  →  Bacteria

Metagenomic Context

Parent: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5 Manually curated genome
Original version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

Properties

Avg. coverage: 1.00 Longest contig: 7.75 Kbp Bin length: 1.27 Mbp GC content: 37.52 %
Contigs count: 672 Features count: 1509 rRNAs count: 0 tRNAs count: 16

Genome completeness

partial RP 29 / 55 MC: 2 BSCG 27 / 51 ASCG 7 / 38 MC: 1
Displaying items 251-300 of 672 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig3402_scaffold_50930
Species: CG_Desulfob_01 (50%)
2 1075 bp 35.63 1.00 87.35
bjp_ig3402_scaffold_50268
Species: RBG_16_Nitrospirae_43_11_curated (50%)
2 1259 bp 39.00 1.00 75.30
bjp_ig3402_scaffold_13616
Species: RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated (50%)
2 2899 bp 40.67 1.00 42.64
bjp_ig3402_scaffold_17016
Species: Thermodesulfovibrio yellowstonii (50%)
2 2274 bp 39.23 1.00 57.65
bjp_ig3402_scaffold_21871
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 2109 bp 36.56 1.00 68.99
bjp_ig3402_scaffold_18392
Species: RBG_19FT_COMBO_Syntrophobacterales_59_10_curated (50%)
2 2335 bp 42.23 1.00 90.19
bjp_ig3402_scaffold_23206
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 1754 bp 31.58 1.00 49.09
bjp_ig3402_scaffold_31828
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1486 bp 36.61 1.00 89.03
bjp_ig3402_scaffold_19597
Species: Candidatus Omnitrophus sp. SKK-01 (50%)
2 2670 bp 42.77 1.00 89.89
bjp_ig3402_scaffold_45246
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1035 bp 36.81 1.00 53.33
bjp_ig3402_scaffold_44944
Species: Candidatus Magnetobacterium bavaricum (50%)
2 1199 bp 38.53 1.00 69.06
bjp_ig3402_scaffold_35369
Species: BJP_IG2158_Nitrospirales_45_240 (100%)
2 1470 bp 37.62 1.00 101.22
bjp_ig3402_scaffold_19741
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 2357 bp 35.13 1.00 25.71
bjp_ig3402_scaffold_23238
Species: RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated (50%)
2 1824 bp 33.94 1.00 41.28
bjp_ig3402_scaffold_46960
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1154 bp 40.64 1.00 100.61
bjp_ig3402_scaffold_28761
Species: RLO_Nitrospinae_39_15 (50%)
2 1793 bp 34.47 1.00 59.73
bjp_ig3402_scaffold_21281
Species: Desulfococcus multivorans (50%)
2 2220 bp 38.42 1.00 75.00
bjp_ig3402_scaffold_16666
Species: RBG_13_Nitrospirae_39_12_curated (100%)
2 2719 bp 41.38 1.00 97.20
bjp_ig3402_scaffold_35689
Species: BJP_08E140C01_10KDA_Methanosarcinales_43_67 (50%)
2 1392 bp 36.71 1.00 71.77
bjp_ig3402_scaffold_27047
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1886 bp 38.12 1.00 53.92
bjp_ig3402_scaffold_28688
Species: Thermodesulfovibrio yellowstonii (50%)
2 1502 bp 37.82 1.00 69.31
bjp_ig3402_scaffold_35277
Species: Sulfurihydrogenibium azorense (50%)
2 1470 bp 37.55 1.00 92.86
bjp_ig3402_scaffold_21115
Species: Thermodesulfovibrio yellowstonii (50%)
2 2194 bp 35.00 1.00 51.14
bjp_ig3402_scaffold_22142
Species: RLO_WOR_2_51_8 (50%)
2 2133 bp 31.60 1.00 48.52
bjp_ig3402_scaffold_43754
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
2 1331 bp 45.23 1.00 35.39
bjp_ig3402_scaffold_34279
Species: GWF2_Nitrospirae_44_13_curated (100%)
2 1507 bp 39.68 1.00 97.94
bjp_ig3402_scaffold_35427
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1237 bp 37.59 1.00 95.07
bjp_ig3402_scaffold_34650
Species: GWF2_Nitrospirae_44_13_curated (50%)
2 1493 bp 36.84 1.00 85.00
bjp_ig3402_scaffold_42393
Species: Caloramator australicus (50%)
2 1261 bp 39.33 1.00 77.80
bjp_ig3402_scaffold_35794
Species: CG_Nitrosp_02 (100%)
2 1436 bp 34.40 1.00 75.84
bjp_ig3402_scaffold_31773
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1202 bp 38.27 1.00 101.33
bjp_ig3402_scaffold_41936
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1202 bp 37.44 1.00 66.39
bjp_ig3402_scaffold_18261
Species: Rivularia sp. PCC 7116 (50%)
2 2512 bp 34.67 1.00 69.51
bjp_ig3402_scaffold_48571
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1170 bp 35.81 1.00 59.74
bjp_ig3402_scaffold_36686
Species: CG_Nitrosp_01 (50%)
2 1414 bp 30.13 1.00 41.16
bjp_ig3402_scaffold_40363
Species: RLO_Nitrospinae_39_16 (50%)
2 1377 bp 35.37 1.00 96.30
bjp_ig3402_scaffold_43374
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1130 bp 39.82 1.00 96.11
bjp_ig3402_scaffold_38539
Species: RBG_13_Nitrospirae_39_12_curated (50%)
2 1118 bp 33.36 1.00 66.28
bjp_ig3402_scaffold_41353
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1095 bp 41.28 1.00 93.97
bjp_ig3402_scaffold_31131
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (50%)
2 1512 bp 35.32 1.00 35.91
bjp_ig3402_scaffold_48336
Species: CG_Nitrosp_01 (50%)
2 1116 bp 42.38 1.00 83.06
bjp_ig3402_scaffold_34326
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1434 bp 34.87 1.00 47.49
bjp_ig3402_scaffold_50772
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1011 bp 39.96 1.00 88.13
bjp_ig3402_scaffold_34475
Species: RBG_13_OP8X_37_8_curated (100%)
2 1208 bp 34.11 1.00 97.10
bjp_ig3402_scaffold_37453
Species: GWB2_Nitrospirae_47_37_curated (50%)
2 1385 bp 40.29 1.00 101.16
bjp_ig3402_scaffold_47714
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1138 bp 37.79 1.00 94.64
bjp_ig3402_scaffold_40072
Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (50%)
2 1593 bp 41.56 1.00 71.37
bjp_ig3402_scaffold_40570
Species: GWB2_Nitrospirae_47_37_curated (100%)
2 1312 bp 27.44 1.00 51.45
bjp_ig3402_scaffold_29852
Species: Candidatus Magnetoovum chiemensis (50%)
2 1777 bp 36.47 1.00 63.48
bjp_ig3402_scaffold_43003
Species: RBG_13_Nitrospirae_39_12_curated (50%)
2 1235 bp 39.76 1.00 65.10
Displaying items 251-300 of 672 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.