ggKbase | organisms

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5 Manually curated genome
Original version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

Properties

Avg. coverage: 1.00 Longest contig: 7.75 Kbp Bin length: 1.27 Mbp GC content: 37.52 %

Contigs count: 672 Features count: 1509 rRNAs count: 0 tRNAs count: 16

Genome completeness

partial RP 29 / 55 MC: 2 BSCG 27 / 51 ASCG 7 / 38 MC: 1

Displaying items 401-450 of 672 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_27249 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1747 bp	36.52	1.00	71.78
bjp_ig3402_scaffold_24617 Species: RBG_19FT_COMBO_Nitrospirae_42_15_curated (50%)	2	2274 bp	39.01	1.00	63.19
bjp_ig3402_scaffold_31325 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1343 bp	37.30	1.00	41.10
bjp_ig3402_scaffold_34444 Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	1406 bp	39.54	1.00	94.10
bjp_ig3402_scaffold_37447 Species: CG_Nitrosp_02 (50%)	2	1402 bp	36.88	1.00	92.01
bjp_ig3402_scaffold_13488 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2854 bp	28.24	1.00	31.53
bjp_ig3402_scaffold_44280 Species: Geobacter lovleyi (50%)	2	1215 bp	36.63	1.00	63.21
bjp_ig3402_scaffold_45882 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1135 bp	37.97	1.00	100.44
bjp_ig3402_scaffold_29009 Species: Rhodothermus marinus (50%)	2	1731 bp	39.46	1.00	88.21
bjp_ig3402_scaffold_30533 Species: GWC2_Nitrospirae_57_9_curated (50%)	2	1105 bp	34.30	1.00	85.79
bjp_ig3402_scaffold_23382 Species: RBG_19FT_COMBO_Nitrospirae_55_12_curated (50%)	2	2057 bp	40.45	1.00	77.88
bjp_ig3402_scaffold_47994 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1128 bp	37.50	1.00	74.20
bjp_ig3402_scaffold_45278 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1191 bp	36.61	1.00	96.73
bjp_ig3402_scaffold_27066 Species: RBG_16_Nitrospirae_43_8_curated (50%)	2	1830 bp	38.96	1.00	43.11
bjp_ig3402_scaffold_21641	2	2074 bp	32.59	1.00	7.52
bjp_ig3402_scaffold_16744 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (50%)	2	2712 bp	32.37	1.00	63.39
bjp_ig3402_scaffold_28812 Species: Thermodesulfovibrio yellowstonii (100%)	2	1587 bp	38.94	1.00	50.47
bjp_ig3402_scaffold_29452 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1710 bp	38.25	1.00	72.28
bjp_ig3402_scaffold_38090 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1169 bp	40.98	1.00	103.42
bjp_ig3402_scaffold_40575 Species: GWF2_Nitrospirae_44_13_curated (50%)	2	1179 bp	30.96	1.00	50.89
bjp_ig3402_scaffold_8951 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	4254 bp	33.05	1.00	31.52
bjp_ig3402_scaffold_20351 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2263 bp	34.42	1.00	32.35
bjp_ig3402_scaffold_24085 Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	1877 bp	29.73	1.00	29.57
bjp_ig3402_scaffold_37988 Species: R_Planctomycetes_38_41 (50%)	2	1165 bp	37.60	1.00	58.97
bjp_ig3402_scaffold_19460 Species: Candidatus Jettenia caeni (50%)	2	1957 bp	37.15	1.00	80.48
bjp_ig3402_scaffold_19143 Species: R_Elusimicrobia_39_32 (50%)	2	2327 bp	39.54	1.00	71.55
bjp_ig3402_scaffold_48898 Species: marine sediment metagenome (100%)	2	1010 bp	57.62	1.00	90.59
bjp_ig3402_scaffold_28869 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (50%)	2	1584 bp	28.16	1.00	33.52
bjp_ig3402_scaffold_21303 Species: RIFOXYD2_FULL_Planctomycetes_41_16_curated (50%)	2	2143 bp	35.46	1.00	63.56
bjp_ig3402_scaffold_47015 Species: BJP_IG2158_Nitrospirales_45_240 (50%)	2	1153 bp	41.80	1.00	99.39
bjp_ig3402_scaffold_35692 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1303 bp	40.98	1.00	99.23
bjp_ig3402_scaffold_47727 Species: RBG_16_Nitrospirae_43_8_curated (50%)	2	1138 bp	38.49	1.00	99.65
bjp_ig3402_scaffold_10063 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	4153 bp	35.88	1.00	17.48
bjp_ig3402_scaffold_20871 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2257 bp	37.17	1.00	87.73
bjp_ig3402_scaffold_35843 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1002 bp	41.52	1.00	82.34
bjp_ig3402_scaffold_17222	2	2518 bp	37.93	1.00	35.39
bjp_ig3402_scaffold_21899 Species: mine drainage metagenome (50%)	2	2168 bp	69.14	1.00	75.14
bjp_ig3402_scaffold_16282 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2777 bp	30.28	1.00	34.89
bjp_ig3402_scaffold_27260 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1775 bp	34.08	1.00	49.52
bjp_ig3402_scaffold_25761 Species: Desulfobacca acetoxidans (50%)	2	1905 bp	32.86	1.00	54.17
bjp_ig3402_scaffold_30621 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1655 bp	35.83	1.00	82.48
bjp_ig3402_scaffold_50526 Species: BJP_IG2158_Nitrospirales_45_240 (50%)	2	1457 bp	41.18	1.00	76.18
bjp_ig3402_scaffold_41733 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1279 bp	35.81	1.00	49.02
bjp_ig3402_scaffold_38392 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1140 bp	37.28	1.00	81.84
bjp_ig3402_scaffold_26201 Species: Ignavibacterium album (50%)	2	2015 bp	34.14	1.00	87.69
bjp_ig3402_scaffold_26559 Species: GWF2_Nitrospirae_44_13_curated (50%)	2	1857 bp	40.71	1.00	99.84
bjp_ig3402_scaffold_16741 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2713 bp	40.91	1.00	68.01
bjp_ig3402_scaffold_43919 Species: RBG_16_Nitrospirae_43_8_curated (50%)	2	1042 bp	42.42	1.00	94.72
bjp_ig3402_scaffold_33657 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1479 bp	39.62	1.00	100.81
bjp_ig3402_scaffold_35328 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1162 bp	39.41	1.00	88.04

Displaying items 401-450 of 672 in total

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

09MI20_z3_2014_Nitrospirae_38_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

09MI20_z3_2014_Nitrospirae_38_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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