ggKbase | organisms

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5 Manually curated genome
Original version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

Properties

Avg. coverage: 1.00 Longest contig: 7.75 Kbp Bin length: 1.27 Mbp GC content: 37.52 %

Contigs count: 672 Features count: 1509 rRNAs count: 0 tRNAs count: 16

Genome completeness

partial RP 29 / 55 MC: 2 BSCG 27 / 51 ASCG 7 / 38 MC: 1

Displaying items 351-400 of 672 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_33762 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1462 bp	38.17	1.00	91.72
bjp_ig3402_scaffold_41349 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1131 bp	34.66	1.00	57.82
bjp_ig3402_scaffold_26328 Species: delta proteobacterium MLMS-1 (50%)	2	1476 bp	36.92	1.00	63.01
bjp_ig3402_scaffold_46265 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1169 bp	42.26	1.00	74.42
bjp_ig3402_scaffold_24578 Species: CG_Nitrosp_01 (50%)	2	1902 bp	40.80	1.00	83.91
bjp_ig3402_scaffold_22823 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1496 bp	40.44	1.00	99.47
bjp_ig3402_scaffold_19857 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2432 bp	35.61	1.00	74.14
bjp_ig3402_scaffold_29736 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1642 bp	37.52	1.00	88.25
bjp_ig3402_scaffold_27998 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1744 bp	41.28	1.00	88.93
bjp_ig3402_scaffold_37362 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1359 bp	36.64	1.00	79.91
bjp_ig3402_scaffold_36992 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (100%)	2	1117 bp	36.53	1.00	39.21
bjp_ig3402_scaffold_25978 Species: Thermodesulfovibrio yellowstonii (50%)	2	1891 bp	37.02	1.00	59.81
bjp_ig3402_scaffold_45067 Species: Pyrococcus abyssi (50%)	2	1197 bp	37.59	1.00	91.73
bjp_ig3402_scaffold_45182	2	1213 bp	45.67	1.00	28.69
bjp_ig3402_scaffold_47745 Species: GWA2_Nitrospirae_42_11_curated (50%)	2	1114 bp	34.11	1.00	41.20
bjp_ig3402_scaffold_25500 Species: CG_Syntroph_01 (50%)	2	1671 bp	41.83	1.00	87.43
bjp_ig3402_scaffold_22229 Species: GWC2_Deltaproteobacteria_55_46b_curated (50%)	2	2012 bp	43.44	1.00	98.56
bjp_ig3402_scaffold_30815 Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (50%)	2	1121 bp	38.54	1.00	90.45
bjp_ig3402_scaffold_20310 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1981 bp	36.70	1.00	48.76
bjp_ig3402_scaffold_39128 Species: RHI_Planctomycetes_42_15 (100%)	2	1352 bp	35.13	1.00	97.86
bjp_ig3402_scaffold_44551 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1280 bp	31.41	1.00	25.08
bjp_ig3402_scaffold_22025 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (50%)	2	2378 bp	35.16	1.00	76.83
bjp_ig3402_scaffold_43843 Species: GWB2_Geobacteraceae_52_12_curated (50%)	2	1225 bp	41.96	1.00	99.43
bjp_ig3402_scaffold_30850 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1577 bp	34.31	1.00	81.42
bjp_ig3402_scaffold_38455 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1328 bp	37.65	1.00	98.04
bjp_ig3402_scaffold_43107 Species: RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated (50%)	2	1186 bp	40.13	1.00	81.96
bjp_ig3402_scaffold_28486 Species: RBG_13_Deltaproteobacteria_58_19_curated (50%)	2	1704 bp	35.97	1.00	86.97
bjp_ig3402_scaffold_36224 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1442 bp	32.66	1.00	51.80
bjp_ig3402_scaffold_29672 Species: Methylobacter tundripaludum (50%)	2	1700 bp	44.76	1.00	99.88
bjp_ig3402_scaffold_41254 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1292 bp	34.75	1.00	86.15
bjp_ig3402_scaffold_31920 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1539 bp	41.78	1.00	100.20
bjp_ig3402_scaffold_26856 Species: Candidatus Magnetobacterium bavaricum (50%)	2	1696 bp	34.26	1.00	86.67
bjp_ig3402_scaffold_26300 Species: GWC2_Nitrospirae_56_14_curated (50%)	2	1658 bp	33.96	1.00	45.05
bjp_ig3402_scaffold_24774 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1850 bp	39.84	1.00	81.57
bjp_ig3402_scaffold_37530 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1346 bp	43.02	1.00	92.72
bjp_ig3402_scaffold_23179 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1916 bp	31.16	1.00	69.21
bjp_ig3402_scaffold_21937 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2140 bp	30.75	1.00	39.81
bjp_ig3402_scaffold_38173 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1173 bp	41.60	1.00	79.03
bjp_ig3402_scaffold_31665 Species: R_Nitrospirae_40_19 (50%)	2	1154 bp	40.12	1.00	49.39
bjp_ig3402_scaffold_27971 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1782 bp	38.05	1.00	43.43
bjp_ig3402_scaffold_26095 Species: RBG_13_Nitrospirae_41_22_curated (50%)	2	1885 bp	39.26	1.00	40.90
bjp_ig3402_scaffold_21567 Species: RBG_13_Nitrospirae_43_8_curated (100%)	2	2194 bp	38.74	1.00	63.58
bjp_ig3402_scaffold_34959 Species: RBG_16_Deltaproteobacteria_58_17_curated (50%)	2	1830 bp	43.66	1.00	60.33
bjp_ig3402_scaffold_40899 Species: RBG_16_Planctomycetes_55_9_curated (50%)	2	1302 bp	32.64	1.00	96.08
bjp_ig3402_scaffold_20124 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2173 bp	30.79	1.00	43.76
bjp_ig3402_scaffold_22436 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1926 bp	33.90	1.00	52.34
bjp_ig3402_scaffold_22366 Species: BJP_IG2158_Nitrospirales_45_240 (100%)	2	2134 bp	38.38	1.00	70.99
bjp_ig3402_scaffold_25990 Species: Acidovorax sp. JS42 (100%)	2	2012 bp	30.86	1.00	53.23
bjp_ig3402_scaffold_38545 Species: GWF2_Lentisphaerae_45_14_curated (50%)	2	1369 bp	32.87	1.00	92.70
bjp_ig3402_scaffold_36580 Species: RLO_Nitrospinae_39_16 (50%)	2	1366 bp	38.87	1.00	66.76

Displaying items 351-400 of 672 in total

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

09MI20_z3_2014_Nitrospirae_38_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

09MI20_z3_2014_Nitrospirae_38_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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