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RifSed_csp1_16ft_3_scaffold_15984_8

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(4163..4705)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N2_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 180.0
  • Bit_score: 225
  • Evalue 3.30e-56
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 180.0
  • Bit_score: 225
  • Evalue 9.50e-57
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 180.0
  • Bit_score: 299
  • Evalue 2.00e-78

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 543
TTGCCCGGAGACCTCATCGGGACTTCCGAAGAATTCATTCCAAAGGATGGGGCTTATGAAGACAGGGGGAATATCTACGCAGCGGTAACCGGGATCGTGAAAATAAATGCTAAAGAGCGTTCCATTTCAGTTACTCCTGTTACGAGCACGCCACCGTTCCTGCAGGTGGGAGATATCGTCGTTGGTCAGGTCACAGATCTCAAGGAGTCCGTTGTATTGCTTGAAATAGCAGGCATTAAAGGAAAAGGAGAACGGGCAATAGTTGATGCAGAAGACGCTGCGATACATGTTTCAAATGTCAAGGATGCCTATGTCAAGGATCTGTCATACGAATTTGCGCCTTTTGATATAATCAAGGCAAGGGTTATAGACCTGCGCAACATGCGACTTACCACAGTGAATAAAGAGCTCGGTGTCATGAAGGCATATTGCGGCAGCTGCAAGACCGTGTTAAAAAGAGAGAATGATAAACTTAAATGTCCCAAATGCAAAAGGAGTGAGACAAGAAAGCTATCATCAGATTATGGGACAGGTATTGTTTAG
PROTEIN sequence
Length: 181
LPGDLIGTSEEFIPKDGAYEDRGNIYAAVTGIVKINAKERSISVTPVTSTPPFLQVGDIVVGQVTDLKESVVLLEIAGIKGKGERAIVDAEDAAIHVSNVKDAYVKDLSYEFAPFDIIKARVIDLRNMRLTTVNKELGVMKAYCGSCKTVLKRENDKLKCPKCKRSETRKLSSDYGTGIV*