ggKbase home page

RifSed_csp1_16ft_3_scaffold_20663_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: 1794..1979

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BU98_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 94
  • Evalue 3.00e-17
rpoE2; DNA-directed RNA polymerase subunit E' similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 94
  • Evalue 8.50e-18
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 61.0
  • Bit_score: 114
  • Evalue 5.20e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Methanosarcinales_43_67 → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGGCTGAGAATGTCTGCAAAGAATGCCACAGATTAGTAAAAGGCCAGGTTTGTGAAGCCTGCAATTCTTCGGCTCTTACCTCGGACTGGAGTGGTTATGTCGTGATACTTGATCCTGAGAAGTCTGCCATCGCCAAAAGGCTTGGTGTCAAATTACCCGGCAAATACGCATTGAAGGTGCGGTAG
PROTEIN sequence
Length: 62
MAENVCKECHRLVKGQVCEACNSSALTSDWSGYVVILDPEKSAIAKRLGVKLPGKYALKVR*