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RifSed_csp1_16ft_3_scaffold_21984_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(2068..2709)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL1_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 213.0
  • Bit_score: 287
  • Evalue 6.50e-75
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 213.0
  • Bit_score: 368
  • Evalue 4.10e-99
rpl1P; 50S ribosomal protein L1P similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 213.0
  • Bit_score: 287
  • Evalue 1.80e-75

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 642
TTGGAACATGAAAAAATATTAACTGCCGTAAAACAGGCAATTGAGACATCGCCGCAGCGTAAATTTTCAGAAAGTATTGATATTGCGATCAACCTCAAGAACCTTGATATGAACCAGCCGCAGAACAGGGTCGATGAAGAGATAATCCTGCCAAACGGTCTTGGTAGAACGATAAAGATCGCGGTTTTCGCAAAAGGCGAAACAGCCATGAGAGCAAAAGGGGCTGGAGCTGACTATGTTTTTGACCCTGAGGAAATAAACGTCCTTGGAGAAGATAAAACAAGAGCAAAGAACCTTGCAGAAGAAATGACCTTCTTTATATCAGAAGCTGCTTTCATGCCAGCTATTGGCAAAACCCTGGGTCAGGTACTCGGGCCAAGGGGCAAGATGCCTATACCACTGACGCCGGACAAGGATGTCGTCCAGGTGATCAACAAAGCAAGGAATTCCATAAAAGTGCGATCAAAAGACAAGATGACATTTCACATCTCAGTGGGGAAAAGAGAGATGCCCCCGGAGAAGATATCAGAGAACATAGAAGCGATAGTAAACCGCCTTGAGCATAGATACGAGCGCGGTATGTACAATGTAAAATCCATATACGTCAAGACAACAATGGGACCATCAGTGAGGGTGATTTAA
PROTEIN sequence
Length: 214
LEHEKILTAVKQAIETSPQRKFSESIDIAINLKNLDMNQPQNRVDEEIILPNGLGRTIKIAVFAKGETAMRAKGAGADYVFDPEEINVLGEDKTRAKNLAEEMTFFISEAAFMPAIGKTLGQVLGPRGKMPIPLTPDKDVVQVINKARNSIKVRSKDKMTFHISVGKREMPPEKISENIEAIVNRLEHRYERGMYNVKSIYVKTTMGPSVRVI*