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RifSed_csp1_16ft_3_scaffold_24046_3

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(1137..1868)

Top 3 Functional Annotations

Value Algorithm Source
rrp41p; putative exosome complex exonuclease 1 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 233.0
  • Bit_score: 362
  • Evalue 5.10e-98
Exosome complex component Rrp41 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 233.0
  • Bit_score: 362
  • Evalue 1.80e-97
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 243.0
  • Bit_score: 442
  • Evalue 2.50e-121

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 732
ATGAGTAAACCAGAAAAGTTAATTGAGAACGGCATTCGTCTTGATGGCAGAAAACCAGATGAATTAAGACCCATCAAGATCAAAGTCGGGGTTTTGAATAGAGCGGACGGTTCATGCTATTTTGAATTCGGAAAAAACAAAGTAATAGCTGCGGTCTATGGTCCCAGGGAGGTCCATCCGCGCCACCAGCAGAAATCAACAAGCGCAGTTGTAAGGTACAGATATAATATGGCGTCGTTCTCTGTTGAAGAACGTAAACGCCCTGGACCGGACAGGAGAAGTATCGAAGTATCGAAGGTGAGCAGGGAAGCGCTGGAACCTGTGATATTCCAGGAGTACTTCCCTCGTACTGCCATCGACATTTTTGTGGAAGTCCTCCAGGCAGACGCAGGCACAAGGACGGCAGGAATAAATGCTGCCTCCATCGCTCTTGCCGACGCAGGGATTCCAATGAAAAGCCTTGTTTCATCCTGCGCAGTTGGGAAAGTAGATGATACTCTTGTGCTTGACCTGAATAAGGATGAAGATAATTATGGACAGGCAGACGTTCCGATCGCGATGACACCCGACGGGAACATAACGCTTCTTCAGATGGATGGTCATCTCACAAGGGAAGAGTTCAGAGAGGGACTTGAGATGGCAAAGAAGGGTTGCCTTGAGATATATGAACTCCAGAAAGCTGCCCTGTTTGAAAAATACCCTGCTCAATCTGAAGGTGATGTCAATGAGTAA
PROTEIN sequence
Length: 244
MSKPEKLIENGIRLDGRKPDELRPIKIKVGVLNRADGSCYFEFGKNKVIAAVYGPREVHPRHQQKSTSAVVRYRYNMASFSVEERKRPGPDRRSIEVSKVSREALEPVIFQEYFPRTAIDIFVEVLQADAGTRTAGINAASIALADAGIPMKSLVSSCAVGKVDDTLVLDLNKDEDNYGQADVPIAMTPDGNITLLQMDGHLTREEFREGLEMAKKGCLEIYELQKAALFEKYPAQSEGDVNE*