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RifSed_csp1_16ft_3_scaffold_24046_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(1865..2656)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W4_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 217.0
  • Bit_score: 294
  • Evalue 8.60e-77
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 267.0
  • Bit_score: 411
  • Evalue 6.70e-112
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 217.0
  • Bit_score: 294
  • Evalue 2.40e-77

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 792
ATGGATAAAAAATTAGTGATCCCAGGTGATTTTCTTTCTGATGAAGAAAAACTGGCAGATGAAGGCACATATGTTGAGAATGGAAAAGTTTTTTCATCAGTTCTTGGAATAGCTTCATTAAAGGACCGCATCAGGGTCGTTCCATTCGCAGGTAAATATATACCAAGATCTGGCGACCTGATAGTTGGAGTTGTAAAAGAGATATCCTTTTCTAACTGGATAGTGGATATCCGGTCCCCTTACGACGGTCTTCTTCATATATCAGAATTTCCAAGAAGGATCGAGAATGAGGACATGCCAAAATACCTCAATATCGGTGATTCCATCATGACACTCGTGAGTGATGTGGATGAAAAAATGAAAGTGGAGCTTACGCTGAATGACCAGAGATTAAGACCAATTAAAGAAGGTCGCATCATTGAAGTGACACCATCCAAAGTACCCAGGTTGATAGGCCGGGGCGGTTCTATGATAGCCATGCTGAAAAATGAGACGGGGTGCCATATATTTGTAGGGCAGAATGGCAGGGTCTGGATAGCAGGCAAAGATAAGGGTATGGATCTGGCAGCCAGAGCCATCCTTAAGATCGAACGAGAGACGCACATTTCCGGTCTGACAGAAAGGATCACCATGTTCCTGAAAGAAGAAAAAGGCCAGAAGATAATAGAAAAAGGACCACAGGAATTAGAGGAAGAAATAGTTGAAGAAGAACCTCAGAAGAAAGAGGAAGAAACCGTTGAAAAGGAAAGTCAGGGAGGGATCCTTGATGAACTTCTCGGAGGAAATTTATGA
PROTEIN sequence
Length: 264
MDKKLVIPGDFLSDEEKLADEGTYVENGKVFSSVLGIASLKDRIRVVPFAGKYIPRSGDLIVGVVKEISFSNWIVDIRSPYDGLLHISEFPRRIENEDMPKYLNIGDSIMTLVSDVDEKMKVELTLNDQRLRPIKEGRIIEVTPSKVPRLIGRGGSMIAMLKNETGCHIFVGQNGRVWIAGKDKGMDLAARAILKIERETHISGLTERITMFLKEEKGQKIIEKGPQELEEEIVEEEPQKKEEETVEKESQGGILDELLGGNL*