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RifSed_csp1_16ft_3_scaffold_29051_2

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(366..1151)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 263.0
  • Bit_score: 417
  • Evalue 7.10e-114
DNA-directed RNA polymerase subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 261.0
  • Bit_score: 305
  • Evalue 1.40e-80
UPI0003D1C798 related cluster Tax=unknown RepID=UPI0003D1C798 similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 263.0
  • Bit_score: 316
  • Evalue 1.60e-83

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 786
ATGGAAATTGACATAATCGAATTATCAGAGCGAAAAGCCAGATTTGTTTTATCTGGCGTATCATCCGCGTTCGCCAATGCGTTGAGAAGATGCATTATCTCAGAGGTCCCGGTACTTGCTATCGACGATGTTAATATCTATGATAACACCTCTGTCCTGTTTGATGAACAGCTTGCTTTGAGATTAGGGCTCATTCCTTTGAAAGCCGATGCAGCAAAATATAACCGAACTCAAGACTGCAGCTGCAGTGGACAGGGCTGTGCATTATGCCAGGTATCATTGACCCTTAGCGCAGAAGGTCCCAAAGTAGTATATTCTGGCGACATGGTCTCTACAGACCCGGATGTGCGACCTGCGGAAGCCACGATACCTATCGTGGAACTCAAGGAAAAACATAAGGTCGTGGTTGAGTCCATAGCAAGACTTGGAACCGGAAGACAGCATGCCAAATGGCAGGCTGGTATTGCGAGCGGATACAAGAACATGCCCATTGTAACTATCGAAGACTGTGACCTGTGCGGACAATGCATTGAAGTCTGCCCCCGCAACATTTTAGAATCTAACGGGAGCAAGGTAAAGGTCGTTAATATAATGGAATGTTCTATGTGCAGACTATGCGAGGAAGCATGCGATATGAACTCTATCAAAGTTACAGAGGATCTTCAATCCTTCGTAATGACCTTTGAAACCAACGGCGGAGTTACAGCAGCAGAACTTGCTGTTCAGGCTGCAGGCAGTATCAAGAGTAGAGCGGAGCAGCTTGGCGAGATACTTGAAACGTTCTGA
PROTEIN sequence
Length: 262
MEIDIIELSERKARFVLSGVSSAFANALRRCIISEVPVLAIDDVNIYDNTSVLFDEQLALRLGLIPLKADAAKYNRTQDCSCSGQGCALCQVSLTLSAEGPKVVYSGDMVSTDPDVRPAEATIPIVELKEKHKVVVESIARLGTGRQHAKWQAGIASGYKNMPIVTIEDCDLCGQCIEVCPRNILESNGSKVKVVNIMECSMCRLCEEACDMNSIKVTEDLQSFVMTFETNGGVTAAELAVQAAGSIKSRAEQLGEILETF*