ggKbase home page

RifSed_csp1_16ft_3_scaffold_33788_6

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(2822..3442)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor 2 subunit beta Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYR2_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 206.0
  • Bit_score: 267
  • Evalue 8.80e-69
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 205.0
  • Bit_score: 349
  • Evalue 2.50e-93
Eukaryotic translation initiation factor 2 beta subunit similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 202.0
  • Bit_score: 268
  • Evalue 1.50e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 621
ATGAACGATTACCTGGAATATCTGGATAGAGCGCAGTCAAAACTGCCCGAGATCAGGGGCTCCGGGGAGCGCTTTGTTGTTCCTGAGCCAAAGCTTCTTACTGAAGGAAAGACAAATGTTTTTGAAAATTTTGCGGCCATTGCAGATAAACTGAACCGGGAGCCTGAACACTTATTGAAATTCCTGTTGAGGGAATTGGGCACTGCTGGTAAATTCGACGGCGCCAGGGCGTCGTTCAATGGCAGGTTTTCATCAAGCCTGGTAGCAGAGATCATTGAAGCATATTTGAAGGAATATGTAACATGTTCCGAATGCGGAAGACCCGATACTCATCTTATCAAAGTTGAAAGGATATTGACGCTGAGATGCGATGCCTGCGGCGCCCACAGACCTGTAACGAAACGCCAGGCTTCAGTAATTGTAAAAGAGGATGCCATTAAAGAGGGAGAATCCTATGATGTAACAATAAATGCCGTGGGAAGGAAAGGAGATGGCATCGCCAAGAAGGATAAATATACTATTTATGTTCCTGGTGTGAAAAAAGGGGACATTGTTAAAATAAAGATCAAAAAGATCACGGGTAATCTGGCATTTGCCGACCTTATTGAAAAGAAAGGATAA
PROTEIN sequence
Length: 207
MNDYLEYLDRAQSKLPEIRGSGERFVVPEPKLLTEGKTNVFENFAAIADKLNREPEHLLKFLLRELGTAGKFDGARASFNGRFSSSLVAEIIEAYLKEYVTCSECGRPDTHLIKVERILTLRCDACGAHRPVTKRQASVIVKEDAIKEGESYDVTINAVGRKGDGIAKKDKYTIYVPGVKKGDIVKIKIKKITGNLAFADLIEKKG*