ggKbase home page

RifSed_csp1_16ft_3_scaffold_40890_3

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: 2918..3355

Top 3 Functional Annotations

Value Algorithm Source
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ73368.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KCZ73368.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 146.0
  • Bit_score: 235
  • Evalue 3.70e-59
dTDP-glucose 4,6-dehydratase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DF2_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 145.0
  • Bit_score: 207
  • Evalue 5.80e-51
dTDP-glucose 4,6-dehydratase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 145.0
  • Bit_score: 207
  • Evalue 1.70e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 438
ATGAAAAACAAGATCATAGTCACAGGAGGAGCAGGTTTTATCGGAAGCCACATAGTTGACCGGCTGCTTTCTCTCGGGAATGAAGTAACAGTTATCGATAACCTGAGTTCAGGAAGAATGGAATTTCTCAAAGCCCATTCCAGAGACCCCAATTTCAAGCTCGTTAAGCTTGACCTGCTGGATACCGAAAAACTTAACAAAGCAATTGCAGGCGCTGATATGATATATCATCTCGCAGCAAATCCTGACGTCCGGCTTGGCGCCGCGGACACAAAGGTCCATCTTGAACAGAACATCATCGCTACATATAATGTGCTTGAAGCCATGCGAATCAATAAGCTGGAAAATATTGCATTCACCTCCACATCCACTGTATATGGCGAAGCTGCGATAATACCCACTCTGGAGAATTACGGCCCCCTTATCCCAATATCATTA
PROTEIN sequence
Length: 146
MKNKIIVTGGAGFIGSHIVDRLLSLGNEVTVIDNLSSGRMEFLKAHSRDPNFKLVKLDLLDTEKLNKAIAGADMIYHLAANPDVRLGAADTKVHLEQNIIATYNVLEAMRINKLENIAFTSTSTVYGEAAIIPTLENYGPLIPISL