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RifSed_csp1_16ft_3_scaffold_76395_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(2058..2225)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 54.0
  • Bit_score: 98
  • Evalue 2.60e-18
Thiamine biosynthesis protein ThiC Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RFU5_METP4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 54.0
  • Bit_score: 71
  • Evalue 2.50e-10
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 56.0
  • Bit_score: 73
  • Evalue 1.80e-11

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 168
ATGGCGATCGCTCGAAGAGACCTTGACTGGAACAGGCAGTTCGGGTTAGCGATCGATAGCGAGAAAGCCAGGAAGATCCATGCAAGGAGCAAGAATGTGGATACATGCAGCATGTGCGGGGAGCTATGCTCGATAAAGATGATGCGGGATGTAATGAAAAAAGCGTAA
PROTEIN sequence
Length: 56
MAIARRDLDWNRQFGLAIDSEKARKIHARSKNVDTCSMCGELCSIKMMRDVMKKA*