ggKbase home page

gwc1_scaffold_706

Alias: GWC1_OD1-like_39_12_4

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_706_1

Not on your lists

comp(2..1117)
-----------------
DNA (1116bp)
protein (372aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:KKS35732.1}; Flags: Fragment;; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
serine/threonine protein kinase
NHL repeat containing protein alias=gwf2_scaffold_1238_77 id=5096102 tax=PER_GWF2_38_31 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=RuBisCO project
gwc1_scaffold_706_2

Not on your lists

1306..2229
-----------------
DNA (924bp)
protein (308aa)
carboxypeptidase n=1 Tax=Ornithinibacillus scapharcae TW25 RepID=UPI000225C00F
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:KKS35733.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
gwc1_scaffold_706_3

Not on your lists

2257..3543
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35734.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
Respiratory burst oxidase-like protein
Oxidoreductase alias=gwe2_scaffold_97_70 id=2193058 tax=GWE2_OD1_40_11 species=Streptomyces sviceus ATCC 29083 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
gwc1_scaffold_706_4

Not on your lists

3611..3994
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35735.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
gwc1_scaffold_706_5

Not on your lists

comp(4448..5002)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35736.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
hypothetical protein
Uncharacterized protein
gwc1_scaffold_706_6

Not on your lists

comp(5281..5898)
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35737.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_706_7

Not on your lists

6206..8017
-----------------
DNA (1812bp)
protein (604aa)
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KKS35738.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GTP-binding protein TypA/BipA
GTP-binding protein TypA/BipA
gwc1_scaffold_706_8

Not on your lists

comp(8572..9297)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35739.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
hypothetical protein
Putative tRNA pseudouridine 5S synthase
gwc1_scaffold_706_9

Not on your lists


9371..10657
-----------------
DNA (1287bp)
protein (429aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] alias=RAAC4_OD1_789 id=5226722 tax=RAAC3_TM7 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes
Histidine-tRNA ligase {ECO:0000313|EMBL:KKS35740.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
histidyl-tRNA synthetase
gwc1_scaffold_706_10

Not on your lists

10900..11481
-----------------
DNA (582bp)
protein (194aa)
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KKS35741.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein
gwc1_scaffold_706_11

Not on your lists

comp(11908..12603)
-----------------
DNA (696bp)
protein (232aa)
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000313|EMBL:KKQ99103.1}; TaxID=1618899 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_12.;"
Undecaprenyl-diphosphatase
gwc1_scaffold_706_12

Not on your lists

12787..13482
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUL2_9GAMM alias=ACD22_36788.36215.20G0007,ACD22_36788.36215.20_7,ACD22_C00011G00007 id=22607 tax=ACD22 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3 organism_desc=WWE3
Periplasmic thiol:disulfide interchange protein DsbA {ECO:0000313|EMBL:KKS35743.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
Sodium/proton antiporter
gwc1_scaffold_706_13

Not on your lists

comp(13613..16531)
-----------------
DNA (2919bp)
protein (973aa)
uvrD; DNA-dependent ATPase I and helicase II (EC:3.6.4.12)
DNA/RNA helicase, superfamily I {ECO:0000313|EMBL:KKS35744.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
UvrD/REP helicase alias=gwe2_scaffold_97_64 id=2193048 tax=GWE2_OD1_40_11 species=Niabella soli DSM 19437 genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes
gwc1_scaffold_706_14

Not on your lists

comp(16915..17538)
-----------------
DNA (624bp)
protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35745.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
gwc1_scaffold_706_15

Not on your lists

comp(17654..18949)
-----------------
DNA (1296bp)
protein (432aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS35746.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
sigA; RNA polymerase sigma factor RpoD
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
gwc1_scaffold_706_16

Not on your lists

comp(18939..20663)
-----------------
DNA (1725bp)
protein (575aa)
Primase protein {ECO:0000313|EMBL:KKR19096.1}; TaxID=1618954 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_39_37.;"
DNA primase
DNA primase
gwc1_scaffold_706_17
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(20783..24460)
-----------------
DNA (3678bp)
protein (1226aa)
DNA-directed RNA polymerase subunit beta' Tax=GWE1_OD1_40_20
DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta'
gwc1_scaffold_706_18
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(24505..27768)
-----------------
DNA (3264bp)
protein (1088aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=GWE1_OD1_40_20
DNA-directed RNA polymerase subunit beta
gwc1_scaffold_706_19

Not on your lists

comp(28092..28349)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZG7_9BACT alias=RAAC19_AAC14_scaffold_1970_8,RAAC19_C00020G00008 id=699741 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
Uncharacterized protein {ECO:0000313|EMBL:KKS35750.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
gwc1_scaffold_706_20

Not on your lists

comp(28349..28645)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35751.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
hypothetical protein
hypothetical protein Magn03008503
gwc1_scaffold_706_21

Not on your lists

comp(28645..29223)
-----------------
DNA (579bp)
protein (193aa)
LexA repressor {ECO:0000313|EMBL:KKS35752.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
DNA polymerase V subunit
LexA repressor
gwc1_scaffold_706_22

Not on your lists

comp(29228..29434)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35753.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
gwc1_scaffold_706_23

Not on your lists

comp(30196..30684)
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR69036.1}; TaxID=1618965 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_69.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
hypothetical protein alias=ACD61_24830.19977.11G0004,ACD61_24830.19977.11_4,ACD61_C00038G00004 id=91752 tax=ACD61 species=Monosiga brevicollis genus=Monosiga taxon_order=Choanoflagellida taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
gwc1_scaffold_706_24

Not on your lists

comp(30717..31640)
-----------------
DNA (924bp)
protein (308aa)
PGA biosynthesis protein CapA {ECO:0000313|EMBL:KKS35755.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
capsular polyglutamate synthetase
PGA biosynthesis protein CapA
gwc1_scaffold_706_25

Not on your lists

comp(32209..32742)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ99117.1}; TaxID=1618899 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_12.;"
gwc1_scaffold_706_26
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(32912..34591)
-----------------
DNA (1680bp)
protein (560aa)
AAA ATPase Tax=GWE1_OD1_40_20
helicase
AAA ATPase
gwc1_scaffold_706_27

Not on your lists

comp(34599..35282)
-----------------
DNA (684bp)
protein (228aa)
trmD; tRNA (guanine-1-)-methyltransferase (EC:2.1.1.31)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKS35758.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
tRNA (guanine-N(1)-)-methyltransferase
gwc1_scaffold_706_28

Not on your lists

comp(35819..36175)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35759.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
gwc1_scaffold_706_29
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(36371..36685)
-----------------
DNA (315bp)
protein (105aa)
UPF0109 protein LDC_0451 Tax=GWE1_OD1_40_20
hypothetical protein
UPF0109 protein LDC_0451
gwc1_scaffold_706_30

Not on your lists


comp(36831..37268)
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S16 {ECO:0000313|EMBL:KKS35761.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
30S ribosomal protein S16
30S ribosomal protein S16
Displaying items 1-30 of 56 in total

View Taxonomy