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js4906-27-3_S30_scaffold_9_11

Organism: js4906-27-3_S30_Melainabacteria_curated_32_34

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 12709..13302

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Clostridium sp. CAG:306 RepID=R6PAQ6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 235
  • Evalue 2.70e-59
RNA polymerase sigma factor {ECO:0000313|EMBL:CDC21393.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 235
  • Evalue 3.80e-59
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 23.9
  • Coverage: 234.0
  • Bit_score: 59
  • Evalue 7.50e-07

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Taxonomy

Clostridium sp. CAG:306 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGCCGACAAATCAAGAGGTTAATTTAAAAGAGTATAGTGGTCTAATAGAAACGATTGCCAAGAGTGAATATCAAAGACTCTCAACAACAGGTATAGTTGAGTATTTAGAATTGGTAAATTTGGGAACACAGACAATATATAATCTTTTCAAGGCTGCACCAAATAGAGAGTTTAACAACTCATATTTATCTACGGCTATTAAGTGGGCAATTAGAAATGAGATAAGACGTAGATATAAATGGTATTCTTGTAGAAGTTCAAGAGCGACACAAGAGTCAATACAAGAAGATTTAAGAATGGCTGTTTACAAGACAGTTTTGTCTATTGACGAAATGGCTGAAAGTGAAAATCCTACACAAATTAGGGATAATTCACAAACTCCAGATGAGTTGTGTGAATTTAGAGAATTGAAAAGAGCAGTAGAGGCATGTATAAAGAAACTTCCACCTCGAGAAAAGTTGTTTATTGAAAAGAAATTTTTTGAAGATAAAAAATTGAGAGATTTAGCTGACGAATTTAACTTGTCACAATCAAGGGTGTCGAGGATAATTCAGTCAGGATTAAACAAGATAAAAAAAGAGTTGTGCAAGTAG
PROTEIN sequence
Length: 198
MPTNQEVNLKEYSGLIETIAKSEYQRLSTTGIVEYLELVNLGTQTIYNLFKAAPNREFNNSYLSTAIKWAIRNEIRRRYKWYSCRSSRATQESIQEDLRMAVYKTVLSIDEMAESENPTQIRDNSQTPDELCEFRELKRAVEACIKKLPPREKLFIEKKFFEDKKLRDLADEFNLSQSRVSRIIQSGLNKIKKELCK*