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Ig8139_scaffold_80938

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Displaying items 1-30 of 95 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8139_scaffold_80938_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(328..2460)
DNA (2133bp) protein (711aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA helicase II / ATP-dependent DNA helicase PcrA Tax=Eubacterium sp. CAG:38 RepID=R7HAT3_9FIRM
DNA helicase II / ATP-dependent DNA helicase PcrA
Ig8139_scaffold_80938_2
unknown

Not on your lists

comp(2561..3226)
DNA (666bp) protein (222aa)

This feature has no annotations

Ig8139_scaffold_80938_3
unknown

Not on your lists

3405..4421
DNA (1017bp) protein (339aa)

This feature has no annotations

Ig8139_scaffold_80938_4
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4615..6243)
DNA (1629bp) protein (543aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AFA50255.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFA50255.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
23S rRNA (Uracil-5-)-methyltransferase RumA Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE0_ACEWD
Ig8139_scaffold_80938_5
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6307..6906)
DNA (600bp) protein (200aa)
Transcriptional regulator TetR family Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE1_ACEWD
transcriptional regulator TetR family
Transcriptional regulator TetR family {ECO:0000313|EMBL:AFA50256.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7033..9144)
DNA (2112bp) protein (704aa)
Phage infection protein YhgE Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE2_ACEWD
yhgE; phage infection protein YhgE
Phage infection protein YhgE {ECO:0000313|EMBL:AFA50257.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_7
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9416..11035
DNA (1620bp) protein (540aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) Tax=Dehalobacter RepID=K4KR66_9FIRM
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Diguanylate cyclase {ECO:0000313|EMBL:EQB21556.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
Ig8139_scaffold_80938_8
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11063..12673
DNA (1611bp) protein (537aa)
Diguanylate cyclase with PAS/PAC sensor Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U5G7_ETHHY
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADU25634.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Ig8139_scaffold_80938_9
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..13075)
DNA (321bp) protein (107aa)
Thioredoxin Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE3_ACEWD
trxA1; thioredoxin TrxA1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13106..13672)
DNA (567bp) protein (189aa)
Iron-sulfur flavoprotein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE4_ACEWD
iron-sulfur flavoprotein
Iron-sulfur flavoprotein {ECO:0000313|EMBL:AFA50259.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_11
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13914..14405)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE5_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50260.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_12
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14494..14655)
DNA (162bp) protein (54aa)
Rubredoxin Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE6_ACEWD
rdx; rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_13
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14847..15014)
DNA (168bp) protein (56aa)
Ferredoxin Tax=Clostridiales RepID=FER_BUTME
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:ADO39496.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Ig8139_scaffold_80938_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15084..15923)
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE7_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50262.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_15
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15929..16915)
DNA (987bp) protein (329aa)
dnaX2; DNA polymerase III gamma/tau subunit DnaX2 (EC:2.7.7.7)
DNA polymerase III gamma/tau subunit DnaX2 {ECO:0000313|EMBL:AFA50263.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AFA50263.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
DNA polymerase III gamma/tau subunit DnaX2 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE8_ACEWD
Ig8139_scaffold_80938_16
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16939..17259)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCE9_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50264.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_17
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17252..19318)
DNA (2067bp) protein (689aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
dTMP kinase {ECO:0000256|SAAS:SAAS00031932}; EC=2.7.4.9 {ECO:0000256|SAAS:SAAS00031932};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Thymidylate kinase Tmk Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF0_ACEWD
Ig8139_scaffold_80938_18
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19528..19854
DNA (327bp) protein (109aa)
Thioredoxin Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF1_ACEWD
trxA2; thioredoxin TrxA2
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_19
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19948..21897)
DNA (1950bp) protein (650aa)
metG; methionyl-tRNA synthetase MetG (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Methionine--tRNA ligase Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF2_ACEWD
Ig8139_scaffold_80938_20
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22247..23089)
DNA (843bp) protein (281aa)
rsmI; ribosomal RNA small subunit methyltransferase I (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ribosomal RNA small subunit methyltransferase I Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF3_ACEWD
Ig8139_scaffold_80938_21
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23090..24478)
DNA (1389bp) protein (463aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF4_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50269.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_22
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24491..25846)
DNA (1356bp) protein (452aa)
dnaB; replicative DNA helicase DnaB (EC:3.6.1.-)
Replicative DNA helicase DnaB {ECO:0000313|EMBL:AFA50270.1}; EC=3.6.1.- {ECO:0000313|EMBL:AFA50270.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Replicative DNA helicase DnaB Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF5_ACEWD
Ig8139_scaffold_80938_23
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25861..26310)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF6_ACEWD
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26307..28280)
DNA (1974bp) protein (658aa)
Signal transduction phosphoesterase YybT-like protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF7_ACEWD
Signal transduction phosphoesterase YybT-like protein {ECO:0000313|EMBL:AFA50272.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
signal transduction phosphoesterase YybT-like protein
Ig8139_scaffold_80938_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28277..29230)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF8_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50273.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_26
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29512..29739)
DNA (228bp) protein (76aa)
30S ribosomal protein S18 Tax=Eubacterium limosum (strain KIST612) RepID=E3GR77_EUBLK
hypothetical protein
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Ig8139_scaffold_80938_27
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29757..30200)
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCF9_ACEWD
ssb2; single-strand binding protein Ssb2
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_28
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30212..30499)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCX0_ACEWD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_29
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30612..31244)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCX1_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50276.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Ig8139_scaffold_80938_30
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31241..31447)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV01108.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
protein of unknown function DUF951
Displaying items 1-30 of 95 in total

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