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64_008_scaffold_256

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_256_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(458..640)
DNA (183bp) protein (61aa)
Penicillinase repressor family protein n=79 Tax=Clostridium difficile RepID=T3I2V4_CLODC
Regulatory protein {ECO:0000313|EMBL:CKH18359.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
regulatory protein
64_008_scaffold_256_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1018..1194
DNA (177bp) protein (59aa)
Uncharacterized protein n=107 Tax=Clostridium difficile RepID=T3IS53_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA62840.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_256_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1420..1620
DNA (201bp) protein (67aa)
Cold shock protein n=176 Tax=Clostridium difficile RepID=C9XJM3_CLODC
cspC; cold shock protein
Cold shock protein CspD {ECO:0000313|EMBL:EQE63856.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_256_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1784..2128)
DNA (345bp) protein (115aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=U3YQR9_CLODI
Predicted ATP-binding protein involved in virulence {ECO:0000313|EMBL:CKH18435.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
64_008_scaffold_256_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2371..2553
DNA (183bp) protein (61aa)
Integrase n=73 Tax=Clostridium difficile RepID=U3ZG33_CLODI
Phage integrase family protein {ECO:0000313|EMBL:EQE63851.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
integrase
64_008_scaffold_256_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2624..3469
DNA (846bp) protein (282aa)
NTF2-like N-terminal transpeptidase domain protein n=132 Tax=Clostridium difficile RepID=T2TLW0_CLODI
putative lipoprotein
NTF2-like N-terminal transpeptidase domain protein {ECO:0000313|EMBL:EQE63855.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_256_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3693..3857)
DNA (165bp) protein (55aa)
Uncharacterized protein n=217 Tax=Clostridium difficile RepID=C9XJM5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK98334.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_008_scaffold_256_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4398..4730)
DNA (333bp) protein (111aa)
Uncharacterized protein n=96 Tax=Clostridium difficile RepID=T3GP85_CLODC
decarboxylase
Putative decarboxylase {ECO:0000313|EMBL:CCL22232.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_256_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4974..5615)
DNA (642bp) protein (214aa)
Uncharacterized protein n=128 Tax=Clostridium difficile RepID=G6BRS0_CLODI
putative membrane protein, DUF1648 family
Putative membrane protein, DUF1648 family {ECO:0000313|EMBL:CAJ68872.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_256_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5596..5895)
DNA (300bp) protein (100aa)
ArsR-family transcriptional regulator n=14 Tax=Clostridium difficile RepID=C9XJM8_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ29715.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_256_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6512..6646)
DNA (135bp) protein (45aa)
Uncharacterized protein n=220 Tax=Clostridium difficile RepID=T3GMH0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQH99637.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_008_scaffold_256_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6857..7609)
DNA (753bp) protein (251aa)
Sulfite exporter TauE/SafE family protein n=82 Tax=Clostridium difficile RepID=T3GJT8_CLODC
putative membrane protein
Sulfite exporter TauE/SafE family protein {ECO:0000313|EMBL:EQI83613.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_008_scaffold_256_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7668..9323)
DNA (1656bp) protein (552aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH18601.1}; EC=2.1.1.- {ECO:0000313|EMBL:CKH18601.1};; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEJ98579.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, AraC family n=53 Tax=Clostridium difficile RepID=Q187V9_CLOD6
Transcriptional regulator, AraC family
64_008_scaffold_256_14
unknown

Not on your lists

comp(9469..9594)
DNA (126bp) protein (42aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BRR5_CLODI
64_008_scaffold_256_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10596..11675)
DNA (1080bp) protein (360aa)
Putative alpha/beta hydrolase {ECO:0000313|EMBL:CKH18628.1}; EC=3.4.11.5 {ECO:0000313|EMBL:CKH18628.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative proline iminopeptidase (PIP), S33family (EC:3.4.11.5)
Prolyl oligopeptidase family protein n=41 Tax=Clostridium difficile RepID=T2TYK8_CLODI
64_008_scaffold_256_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11759..12415)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=3 Tax=Clostridium difficile RepID=Q187W0_CLOD6
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CAJ68877.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_256_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12737..12943
DNA (207bp) protein (69aa)
4-hydroxy-2-oxovalerate aldolase domain protein {ECO:0000313|EMBL:EQI83519.1}; EC=4.1.2.- {ECO:0000313|EMBL:EQI83519.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Uncharacterized protein n=72 Tax=Clostridium difficile RepID=G6BRR2_CLODI
hypothetical protein
64_008_scaffold_256_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13096..13524)
DNA (429bp) protein (143aa)
Flavodoxin n=33 Tax=Clostridium difficile RepID=Q187W1_CLOD6
fldX; Flavodoxin
Flavodoxin {ECO:0000313|EMBL:CAJ68878.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_256_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14000..14941)
DNA (942bp) protein (314aa)
isp; intracellular serine protease (EC:3.4.21.-)
Major intracellular serine protease n=126 Tax=Clostridium difficile RepID=C9XJN4_CLODC
Major intracellular serine protease {ECO:0000313|EMBL:CBE04851.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_256_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15392..15808)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium difficile Y384 RepID=T4HNA2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI83494.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
hypothetical protein
64_008_scaffold_256_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15824..16183
DNA (360bp) protein (120aa)
Helix-turn-helix family protein n=13 Tax=Clostridium difficile RepID=T3DIZ1_CLODI
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22265.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Transcriptional regulator, HTH-type
64_008_scaffold_256_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16131..16460)
DNA (330bp) protein (110aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T4NM17_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22266.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
64_008_scaffold_256_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16605..17927)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=34 Tax=Clostridium difficile RepID=T2TUG9_CLODI
MATE efflux family protein {ECO:0000313|EMBL:EQI83497.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
effD; putative drug/sodium antiporter, MATE family
64_008_scaffold_256_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18016..18669)
DNA (654bp) protein (218aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=38 Tax=Clostridium difficile RepID=T2TSR1_CLODI
Iron dependent repressor, N-terminal DNA binding domain protein {ECO:0000313|EMBL:EQI83498.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
effR; Transcriptional regulator, MarR family
64_008_scaffold_256_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..19201)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium difficile RepID=Q93QZ5_CLODI
Putative uncharacterized protein {ECO:0000313|EMBL:AAK77647.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conjugative transposon protein
64_008_scaffold_256_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19183..19467)
DNA (285bp) protein (95aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=T2TS33_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI83499.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Cna protein B-type domain.
64_008_scaffold_256_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19639..20307)
DNA (669bp) protein (223aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T2TYV1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99646.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
cell surface protein
64_008_scaffold_256_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20855..21667)
DNA (813bp) protein (271aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:CKH19097.1}; EC=3.1.1.24 {ECO:0000313|EMBL:CKH19097.1};; HydD {ECO:0000313|EMBL:AAK77646.1}; Putative hydrolase {ECO:0000313|EMBL:CEJ98599.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
HydD n=124 Tax=Clostridium difficile RepID=Q93QZ6_CLODI
hydD; putative hydrolase
64_008_scaffold_256_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21693..22322)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=49 Tax=Clostridium difficile RepID=Q187X9_CLOD6
hydR; Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CAJ68898.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_256_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22666..24321)
DNA (1656bp) protein (552aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=43 Tax=Clostridium difficile RepID=T2TLX4_CLODI
Displaying items 1-30 of 31 in total

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