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Ig9238_scaffold_242216

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_242216_1
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2..853
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSB6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42644.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_2
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1002..2396
DNA (1395bp) protein (465aa)
Putative transcriptional regulator Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTV1_METMJ
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABN56801.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
Ig9238_scaffold_242216_3
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2451..2750
DNA (300bp) protein (100aa)
DNA polymerase beta domain protein region Tax=Methanofollis liminatans DSM 4140 RepID=J1L0Z4_9EURY
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EJG06300.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
nucleotidyltransferase
Ig9238_scaffold_242216_4
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2833..3168)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FTY6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD41883.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_5
unknown

Not on your lists

comp(3369..3464)
DNA (96bp) protein (32aa)

This feature has no annotations

Ig9238_scaffold_242216_6
BJP_IG2103_Methanoregula_55_19, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3513..3758)
DNA (246bp) protein (82aa)
hypothetical protein Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI00036D3093
hypothetical protein
Tax=BJP_IG2103_Methanoregula_55_19
Ig9238_scaffold_242216_7
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3758..3979)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FST0_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42345.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_8
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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4445..5080
DNA (636bp) protein (212aa)
ThiJ/PfpI domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF28_METPE
ThiJ/PfpI domain-containing protein
Tax=BJP_IG2102_Methanoregula_52_95
Ig9238_scaffold_242216_9
unknown

Not on your lists

5189..5392
DNA (204bp) protein (68aa)

This feature has no annotations

Ig9238_scaffold_242216_10
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5312..6409)
DNA (1098bp) protein (366aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
Putative ribosome biogenesis GTPase RsgA Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RSGA_METAC
putative GTPase related to EngC
Ig9238_scaffold_242216_11
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6650..7903)
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWY8_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60960.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Ig9238_scaffold_242216_12
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8070..9260)
DNA (1191bp) protein (397aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00005}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Argininosuccinate synthase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=ASSY_METHJ
Ig9238_scaffold_242216_13
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9403..12570)
DNA (3168bp) protein (1056aa)
Carbamoyl-phosphate synthase large chain {ECO:0000255|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000255|HAMAP-Rule:MF_01210}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=CARB_METHJ
Ig9238_scaffold_242216_14
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12570..13625)
DNA (1056bp) protein (352aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Carbamoyl-phosphate synthase small chain Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FLE0_METHJ
carbamoyl-phosphate synthase, small subunit
Ig9238_scaffold_242216_15
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13742..14293
DNA (552bp) protein (184aa)
pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01404}; Short=PvlArgDC {ECO:0000256|HAMAP-Rule:MF_01404};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01404};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Pyruvoyl-dependent arginine decarboxylase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMS8_METHJ
Ig9238_scaffold_242216_16
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14435..16231
DNA (1797bp) protein (599aa)
CheC, inhibitor of MCP methylation Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMS9_METHJ
chemotaxis protein CheC
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:ABD39890.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_17
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16281..16784)
DNA (504bp) protein (168aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Probable chemoreceptor glutamine deamidase CheD Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=CHED_METHJ
chemoreceptor glutamine deamidase CheD
Ig9238_scaffold_242216_18
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16807..19863)
DNA (3057bp) protein (1019aa)
CheA signal transduction histidine kinases Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMT1_METHJ
CheA signal transduction histidine kinases
CheA signal transduction histidine kinases {ECO:0000313|EMBL:ABD39888.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_19
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19867..20895)
DNA (1029bp) protein (343aa)
response regulator receiver (CheY-like) modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase 1 {ECO:0000255|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000255|HAMAP-Rule:MF_00099};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Chemotaxis response regulator protein-glutamate methylesterase 1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=CHEB1_METHJ
Ig9238_scaffold_242216_20
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20900..21262)
DNA (363bp) protein (121aa)
Response regulator receiver domain protein (CheY-like) Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMT3_METHJ
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABD39886.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_21
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21332..22153)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMV6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39885.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_22
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22186..23271)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMV7_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39884.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_23
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23275..24879)
DNA (1605bp) protein (535aa)
Type II secretion system protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMV8_METHJ
flagellar assembly protein J
Type II secretion system protein {ECO:0000313|EMBL:ABD39883.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_24
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24891..26753)
DNA (1863bp) protein (621aa)
Type II secretion system protein E Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMV9_METHJ
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ABD39882.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_25
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26756..27526)
DNA (771bp) protein (257aa)
Putative flagellar protein FlaH Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FMW0_METHJ
flagellar accessory protein FlaH
Putative flagellar protein FlaH {ECO:0000313|EMBL:ABD39881.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_26
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27585..28037)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN26_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39880.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_27
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28052..28546)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN28_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39879.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_28
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28555..29457)
DNA (903bp) protein (301aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN29_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39878.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_29
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

29961..30668
DNA (708bp) protein (236aa)
TPR repeat Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN27_METHJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABD39877.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_242216_30
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(30752..31510)
DNA (759bp) protein (253aa)
Putative membrane protein Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHD1_METFS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB03445.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Displaying items 1-30 of 75 in total

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