ggKbase home page

gwc1_scaffold_715

Alias: GWC1_OD1_43_12_4

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_715_1
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(291..1409)
-----------------
DNA (1119bp)
protein (373aa)
Glycosyl transferase, group 1 Tax=GWB1_OD1_42_6
group 1 glycosyl transferase
dth:DICTH_0777 mannosyl transferase alias=ACD8_18562.89438.20G0047,ACD8_18562.89438.20_47,ACD8_C00016G00047 id=136839 tax=ACD8 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_715_2
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(1536..1718)
-----------------
DNA (183bp)
protein (61aa)
Tax=GWB1_OD1_42_6
gwc1_scaffold_715_3
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(1730..2833)
-----------------
DNA (1104bp)
protein (368aa)
Putative glycosyltransferase Tax=GWB1_OD1_42_6
putative glycosyltransferase
group 1 glycosyl transferase alias=ACD56_C00004G00012,ACD56_37718.38410.15G0012,ACD56_37718.38410.15_12 id=83905 tax=ACD56 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_715_4
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(2933..3955)
-----------------
DNA (1023bp)
protein (341aa)
Rod shape-determining protein mreB Tax=GWB1_OD1_42_6
rod shape-determining protein MreB
sti:Sthe_2367 cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins alias=ACD15_20631.25462.16G0014,ACD15_20631.25462.16_14,ACD15_C00030G00014 id=8616 tax=ACD15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_715_5
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(4064..5332)
-----------------
DNA (1269bp)
protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
murA-2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] alias=ACD5_31908.55529.9G0022,ACD5_31908.55529.9_22,ACD5_C00006G00022 id=88107 tax=ACD5 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=GWB1_OD1_42_6
gwc1_scaffold_715_6
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

5400..6485
-----------------
DNA (1086bp)
protein (362aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70164.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
gwc1_scaffold_715_7
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

comp(6624..7382)
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70165.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
gwc1_scaffold_715_8
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(7511..7810)
-----------------
DNA (300bp)
protein (100aa)
Tax=GWB1_OD1_42_6
gwc1_scaffold_715_9
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists


comp(7941..8525)
-----------------
DNA (585bp)
protein (195aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS70167.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
30S ribosomal protein S9
30S ribosomal protein S9
gwc1_scaffold_715_10
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists


comp(8546..8914)
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L13 n=1 Tax=SAR86 cluster bacterium SAR86E RepID=K6G565_9GAMM
Ribosomal protein L13 {ECO:0000313|EMBL:KKS66121.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
rplM; 50S ribosomal protein L13
gwc1_scaffold_715_11
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists


comp(8916..9248)
-----------------
DNA (333bp)
protein (111aa)
50S ribosomal protein L17 Tax=GWB1_OD1_42_6
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17
gwc1_scaffold_715_12
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

comp(9355..10284)
-----------------
DNA (930bp)
protein (310aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] alias=ACD56_10832.52138.15G0052,ACD56_10832.52138.15_52,ACD56_C00002G00052 id=83821 tax=ACD56 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=OD1-i organism_desc=OD1-i
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKS70170.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
DNA-directed RNA polymerase subunit alpha
gwc1_scaffold_715_13
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists


comp(10394..10984)
-----------------
DNA (591bp)
protein (197aa)
30S ribosomal protein S4 {ECO:0000313|EMBL:KKS70171.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
ribosomal protein S4, bacterial/organelle type
30S ribosomal protein S4
gwc1_scaffold_715_14
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists


comp(11122..11583)
-----------------
DNA (462bp)
protein (154aa)
30S ribosomal protein S11 Tax=GWB1_OD1_42_6
rpsK; 30S ribosomal protein S11
30S ribosomal subunit protein S11 alias=gwe2_scaffold_594_8 id=2104195 tax=GWE2_OD1_ACD81_47_12 species=Candidatus Sulcia muelleri SMDSEM genus=Candidatus Sulcia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes
gwc1_scaffold_715_15
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists


comp(11769..12158)
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKS66116.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
30S ribosomal protein S13
hypothetical protein alias=GW2011A_8_4 id=5801916 tax=GW2011_OD1_1 species=unknown genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
gwc1_scaffold_715_16
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(12582..12800)
-----------------
DNA (219bp)
protein (73aa)
Translation initiation factor IF-1 Tax=GWB1_OD1_42_6
translation initiation factor IF-1
Translation initiation factor IF-1
gwc1_scaffold_715_17
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(12896..14773)
-----------------
DNA (1878bp)
protein (626aa)
Putative uncharacterized protein Tax=GWB1_OD1_42_6
Putative uncharacterized protein
gwc1_scaffold_715_18
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(15016..15531)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] alias=ACD81_C00007G00032,ACD81_1724.46206.56G0032,ACD81_1724.46206.56_32 id=133118 tax=ACD81 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
MutT/nudix family protein Tax=GWB1_OD1_42_6
putative hydrolase
gwc1_scaffold_715_19
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists


comp(15624..17495)
-----------------
DNA (1872bp)
protein (624aa)
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS70177.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
alanyl-tRNA synthetase
Alanine--tRNA ligase
gwc1_scaffold_715_20
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

comp(19474..20556)
-----------------
DNA (1083bp)
protein (361aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
cpf:CPF_2037 mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] alias=ACD8_C00018G00043,ACD8_17072.56398.19G0043,ACD8_17072.56398.19_43 id=136942 tax=ACD8 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
tRNA-specific 2-thiouridylase MnmA {ECO:0000313|EMBL:KKS70178.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
gwc1_scaffold_715_21
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

20886..21410
-----------------
DNA (525bp)
protein (175aa)
Elongation factor P {ECO:0000313|EMBL:KKS66110.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
translation elongation factor P
Elongation factor P
gwc1_scaffold_715_22
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(21453..23285)
-----------------
DNA (1833bp)
protein (611aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS66109.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_715_23
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(23407..24576)
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS66108.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
hypothetical protein
gwc1_scaffold_715_24
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

comp(24695..25762)
-----------------
DNA (1068bp)
protein (356aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS69711.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein
transcription initiation factor sigma 70 alias=gwe2_scaffold_297_50 id=1947791 tax=GWE2_OD1_40_11 species=Gemmata obscuriglobus UQM 2246 genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes
gwc1_scaffold_715_25

Not on your lists

comp(25863..26645)
-----------------
DNA (783bp)
protein (261aa)
Protein translocase subunit SecF {ECO:0000313|EMBL:KKS92431.1}; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
protein-export membrane protein SecF
Protein translocase subunit SecF
gwc1_scaffold_715_26
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(26796..28148)
-----------------
DNA (1353bp)
protein (451aa)
Preprotein translocase subunit SecD Tax=GWB1_OD1_42_6
hypothetical protein
Preprotein translocase subunit SecD
Displaying 26 items

View Taxonomy