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ACD42_28_6

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: comp(3651..3920)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal protein S20p similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 87.0
  • Bit_score: 92
  • Evalue 8.10e-17
30S ribosomal protein S20 n=2 Tax=Nitrosococcus oceani RepID=RS20_NITOC (db=UNIREF evalue=3.0e-17 bit_score=90.5 identity=52.87 coverage=95.5555555555556) similarity UNIREF
DB: UNIREF
  • Identity: 52.87
  • Coverage: 95.56
  • Bit_score: 90
  • Evalue 3.00e-17
S20: ribosomal protein S20 (db=HMMTigr db_id=TIGR00029 from=1 to=87 evalue=3.5e-28 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.50e-28

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Taxonomy

R_Gammaproteobacteria_39_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
TTGGCAAATACAGTTTCAGCAAAAAAACGGGCAAAACAAGCTATTGTGCGTCGCGAACGTAACTTTAGTCAGAAATCAACGATGCGTACAGAAATCAAAAAAGTACTGAAAGCCGTTCAGGGTGGCAATAAAACAGAAGCGCAAACGGCTTACAAAAAAGTGGCTATTTTAACAGACAAAGCAGTTGGCAAAAAATTGATTCATGCTAACAAAGCAGCGCGCTTAAAAAGTCGTTTGAATATCAAGTTGAAGGCGATCAGTAATCAGTGA
PROTEIN sequence
Length: 90
LANTVSAKKRAKQAIVRRERNFSQKSTMRTEIKKVLKAVQGGNKTEAQTAYKKVAILTDKAVGKKLIHANKAARLKSRLNIKLKAISNQ*