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ACD42_158_6

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: 1466..2008

Top 3 Functional Annotations

Value Algorithm Source
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 178.0
  • Bit_score: 266
  • Evalue 6.30e-69
seg (db=Seg db_id=seg from=154 to=164) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=58 to=74 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Notes

used in concatenation gene tree kelly wrighton (11/15/12)

Taxonomy

R_Gammaproteobacteria_39_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAGCAGCATTACAAAAAAAATATGAAGAGTCGGTTGTAAAACAACTTCAAAAAGAATTTGGTTATAAAAGCCCGATGCAAGTTCCTCGTATTGCAAAAATCACATTAAACATGGGATTGGGTGAAGCGGTTGAGGATAAAAAAATCATTAACTTTGCGCTAGATGACATGGCTAAAATTGCGGGTCAAAAACCAGTGACCACGTTGTCGAAGAAATCCATTGCGGGTTTCAAAATTCGCGACAATTATCCCATTGGATGCAAAGTTACCTTACGTAGAAAAAAAATGTATGAATTTTTGCATCGTTTGATTTCAATTGCTATTCCCCGTATTCGCGATTTTCGTGGATTCAGTTCAAAAGCATTTGATGGTCGTGGAAATTATAGCTTGGGTATTAAGGAACAAATCGTATTTCCAGAAATACAATACGACAAAATTGATCGAATTCGTGGTTTGGACATTACCATTACAACCACGGCAACTGATGACAAAGAAGCGCGTGCGTTATTAAAAGCATTCGGATTTCCGTTGAAAAGTTAG
PROTEIN sequence
Length: 181
MKAALQKKYEESVVKQLQKEFGYKSPMQVPRIAKITLNMGLGEAVEDKKIINFALDDMAKIAGQKPVTTLSKKSIAGFKIRDNYPIGCKVTLRRKKMYEFLHRLISIAIPRIRDFRGFSSKAFDGRGNYSLGIKEQIVFPEIQYDKIDRIRGLDITITTTATDDKEARALLKAFGFPLKS*