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ACD42_174_3

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: comp(2115..2672)

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase(rfbC) similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 183.0
  • Bit_score: 199
  • Evalue 9.70e-49
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=176 evalue=3.6e-72 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.60e-72
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=179 evalue=2.0e-65 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-65

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAAGCAGAACAATTAAAAATTCCCGGTATGATGTTAATCACGCTGAAAAAACACGGTGATGAGCGGGGGTTTTTTATGGAAACGTTTCGACAGTCTGCACTTCAAGAGATCGGAGTGAATTATCACTTTGTGCAAGACAATCGTTCATTTTCCAGAAAAAATATTTTGCGTGGTATGCACTATCAAATTCAGAAACCCAAAGGGCACATGATTTCAGTGATGCGTGGAAAAATATTTGATGTGGGTGTTGATATGCGAAAAAACTCCCCAGCATTCGGTCAGTGGTGCGGTGTTACGTTATCTGCTGAAAATCCACAACAATTGTTTTTGCCGCCCGGAGTCGCGCATGGTTTTTGTGCACTCGAGGAAGAAAATGAAATGTATTATAAATGCACCGATTATTATGACGCGCAAGACGAGGGTGGTTTGCTGTGGAGTGATGTGTCGATCGGAATTGAATGGCCATTAACTCAACCGATCACCAACACAAGAGATAGTACATTTCCGCTGCTATCCCAAATTCCTGTTAGACGATTACCGCAAGTGACTATATAA
PROTEIN sequence
Length: 186
MKAEQLKIPGMMLITLKKHGDERGFFMETFRQSALQEIGVNYHFVQDNRSFSRKNILRGMHYQIQKPKGHMISVMRGKIFDVGVDMRKNSPAFGQWCGVTLSAENPQQLFLPPGVAHGFCALEEENEMYYKCTDYYDAQDEGGLLWSDVSIGIEWPLTQPITNTRDSTFPLLSQIPVRRLPQVTI*