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PLM4_65_b1_redo_sep16_scaffold_731_3

Organism: PLM4_65_b1_sep16_Acidobacteria_68_17

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 2475..5849

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 1141.0
  • Bit_score: 870
  • Evalue 1.20e-249
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 1159.0
  • Bit_score: 869
  • Evalue 7.80e-250
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 1125.0
  • Bit_score: 897
  • Evalue 1.70e-257

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3375
GTGACGGAGGAAAGGACACCGAACCTTCTCGCCGAGGTGGCCCGGCAGGTCGCCGGGTACCGGGATCTCCTCGCTCGGCTCGCCCGCGGCGAGCGGGCCGGAACCGTCGCGTCGGCGGCGGGGGGCCTCCCGGGAATGCTCCTCGCCTCCCTCGCCACCGACCTGCGTCGCCCGATCGCGATCGTCGTCGCAGACGAGAAGGAAGCGGAGCGCCTCCTCGCCGACCTGCGCGCGGCGGGTCTGACCTCCGTCTTCCACGCGCCGGCGCCCACGCTCACCCCGTACCAGCGGATCCCTCCGTCGCTGAAGGCGCGGCGGGACGAGTTCGCGCTTCTTGCCGCACTCGCGCGCCGCGACGGCGTGGAGGCCATCGTGCTCCCCGCGCGCTCCCTTTTCACGCGGCTTCCCGCGGCGGACCGTCTCCGGAAGCTCTCGGTTTCGCTCGAGGAAGGAAAGGACATATCGCTTCCCCGGGTCGTCGAGCACCTGACCCGCGTCGGGTATCGCCGCGCGGACCTCGCCATCGAGACGGGAGACCTCGCGGTCCGCGGCGGTCTGTTCGACGTCTTCCCCCCGGACCGGGATATGCCGCTGCGCGTCGAGCTCGACGGCGACCGCATCGCCTCTCTTCGCGTGTTCGATCCCGATACGCAGCGGTCCCGCGAGCGCCTGGCCGTCGCGGTGGTCCCGCCGTTCGCGGCGACGGAAGACGCGCAGGAGGCGCGGGCGATGCTCGAAGATCGCATCGGGCGCCCCCCCTCGGAAGCGGAGCGAATCGTCTTCGCTTCCGCCGCCGAGCCCATGCCCGCGGGCTGGCTCGATCACGCCCCCGAAGCCGCGGTCGTCGTCCTCGAGCCGTCGGCCGTCGAAGAGGAGATCGACGAATTCGCCGAGCGCGTCGCCGCAGACCGCGATCCGGACCGCGACTTCTTCGACCCGGAGGAGCTCCTCCAACCGGTCGAGAAGATCCGCGCCGCGGTCGAAGCGGCGAGTCTCTTTTTCGACCGCGTCGGTCTCGCGGCGCGCGGAGAGCTCCTCCGGCTTCCGGCGGAACCGATCGCCGCGCACGCCGGCCGCACCGCGGAGGCCGCGTCGGAGATCGCTCGCGCCTTGACGACGGGGGAGGAAGTGTTCGTCGCGGTCCGCCCGACGGGGGGCGCGGAGAAGTTGAAGCGCTTCGCTCTCGAGTACTCGCTCCACGTCTCCTCCGAGCGGCGTCCCGGAGCCATCGTCTGCGTGCCCGGGGAGATCTCGGCCGGCTTCCGGCTCCGGGAGCCGCGCGCCGCGGTCTACGCCGAGAGCGAGATCTTCGGCGAGGAGAGGCGCTCGGCGGTCGCGCGCGGCCGCCCCTCCGAGGCGTTCCTCTCGGACCTGCGCGATCTGAAGCTCGGCGACGCGGTCGTCCACCGCGACTACGGCATCGGCCTCTTCCGCGGGCTGACCCGCGTTCCGGTCGAGGGAGAAGAGCGCGAGTTCATGGAGATCGCCTACGAGGAGGAGAAGCGGCTGCTCCTGCCGGTGGAGCGGCTGGACCTCGTCCAGAAGTACTCCGGCGTCGAGGGGGTCCAGCCCGCCCTCGACAGGCTCGGCGGCGCCGGGTGGGCGCGCCGGAAGGCTTCGGTCAAGAAGGCGATGCGCGACATGACCGACCAGCTCCTGAAGCTGTACGCGCGCCGCAGCCTCGCGGAAGGGTTTGCCTTCTCGCGCGATTCGCCGTGGCAGAAGGAGTTCGAAGACGCGTTCGAGTACGAGGAGACGCCGGATCAGGCGCAGGCGATCGCGGACGTCAAGCGCGACATGCACTCGGCGAAACCGATGGACCGGCTGCTGTGCGGCGACGTGGGCTACGGCAAGACCGAGGTCGCCATGCGGGCGGCGTTCAAGGCGGTGCTCGACGGCAAGCAGGTCGCGCTGCTGGCGCCGACCACGATCCTCGCCGACCAGCACTACCGGACCTTCCAGCGCCGCTTCGCCGCCTTTCCCGTGACGATCGAGCTGCTCTCGCGTTTCCGGTCGCGCGCCGAGCAGAAGACGATCGTCGAGAAGGTCGCGGCGGGGACGGTGGACATCCTGATCGCAACGCACCGGATGCTCGGTAAGGACCTGGCGTTTCGAGACCTGGGGCTTCTCATCGTCGACGAGGAGCAGCGCTTCGGCGTCGCCCAGAAGGAGAAGCTGAAGGAGTGGAAGGCGTCGATCGACGTTCTTTCCATGTCGGCGACGCCGATCCCGCGGTCGCTGCACCTCGGCCTCTCCGGCCTGCGCGACCTGTCGATCATCGAGACTCCGCCGCGCGACCGGCTCGCGATCGAGACCCAGGTGGTGCCCTCGAAGCCGGACGTCATCCGCGAGGCGATCGCCGCGGAGATCGAGCGGGGAGGACAGGTCTTCTTCGTTCACAACCGCGTCGAGTCGATCGGCCGGGTGCAAAAAGAGCTCCAGGAGCTTCTGCCCTCGGTGCGGATTGCCGTCGCGCACGGCGCGATGCGCGAGGCGGAGCTCGAAAAGGCGATGATGAAGTTCTACTCGCGGGAGGCCGACGTCCTCCTCGCGACGACGATCATCGAGAACGGCCTCGACATCCCCACCGCCAACACCATCTTGATCGACCGCGCCGAGACCTACGGGCTCGCGCAGCTCTACCAGCTGCGCGGCCGCGTGGGACGGAGCGACAAGCCCGCGTACGCCTACCTGCTCGTCGCCGAGAACGTCGCCCTGACGGAGGTCGCGCGCCGGCGGCTCGCCTCCATCCAGGAGTTCTGCGACCTGGGCGCCGGCTTCCGCATTGCGGCCAAGGACCTCGAGATCCGCGGCTCCGGAAACATCCTCGGCGGCGCGCAGTCCGGCCACATCTCGGCGGTCGGGTTCGAGATGTACCTCTCCCTCCTGGAAGAGGCGATCCGCGACATGAAGGGGGAAGAGGTGCGGCCGGAGCGCGCGGTCACGCTGTCACTCGGCCTCGACCTGACGATCCCGCCCGCCTACGTCGCCGACGAGAACTGGCGGATGATGATCTACAAGAAGGTCGCCCGCGCGAAGGACGACGCCGGGCTGGAGGACACGCGCCGCGAGATCGCGGACCGGTTCGGCGAACCCCCCGCGGCTCTGGGACGGTTGATCGAGTACTCGCGGCTTCGCAACCGGGCCGAGCGGCTCGGGGTGACCTCGGTGACCCGGCAGGCCGGGCGCGTTCACCTGCGGCTGGCGGAAGATGCCCGCGTCGACGGCGAACGGCTCGCGGCGCTCGTGCGGGAAACCTCGGGGGCCGCGCTCTCGCCGGGCGGCCTCCTGTCCTTCCCTGCGCCCCCAGCGGGGGAGCTGATTGCGGCGCTGCTCTCGTGGATGAACGAGCTCGAGCGGCGGGAGGCAGCTTGA
PROTEIN sequence
Length: 1125
VTEERTPNLLAEVARQVAGYRDLLARLARGERAGTVASAAGGLPGMLLASLATDLRRPIAIVVADEKEAERLLADLRAAGLTSVFHAPAPTLTPYQRIPPSLKARRDEFALLAALARRDGVEAIVLPARSLFTRLPAADRLRKLSVSLEEGKDISLPRVVEHLTRVGYRRADLAIETGDLAVRGGLFDVFPPDRDMPLRVELDGDRIASLRVFDPDTQRSRERLAVAVVPPFAATEDAQEARAMLEDRIGRPPSEAERIVFASAAEPMPAGWLDHAPEAAVVVLEPSAVEEEIDEFAERVAADRDPDRDFFDPEELLQPVEKIRAAVEAASLFFDRVGLAARGELLRLPAEPIAAHAGRTAEAASEIARALTTGEEVFVAVRPTGGAEKLKRFALEYSLHVSSERRPGAIVCVPGEISAGFRLREPRAAVYAESEIFGEERRSAVARGRPSEAFLSDLRDLKLGDAVVHRDYGIGLFRGLTRVPVEGEEREFMEIAYEEEKRLLLPVERLDLVQKYSGVEGVQPALDRLGGAGWARRKASVKKAMRDMTDQLLKLYARRSLAEGFAFSRDSPWQKEFEDAFEYEETPDQAQAIADVKRDMHSAKPMDRLLCGDVGYGKTEVAMRAAFKAVLDGKQVALLAPTTILADQHYRTFQRRFAAFPVTIELLSRFRSRAEQKTIVEKVAAGTVDILIATHRMLGKDLAFRDLGLLIVDEEQRFGVAQKEKLKEWKASIDVLSMSATPIPRSLHLGLSGLRDLSIIETPPRDRLAIETQVVPSKPDVIREAIAAEIERGGQVFFVHNRVESIGRVQKELQELLPSVRIAVAHGAMREAELEKAMMKFYSREADVLLATTIIENGLDIPTANTILIDRAETYGLAQLYQLRGRVGRSDKPAYAYLLVAENVALTEVARRRLASIQEFCDLGAGFRIAAKDLEIRGSGNILGGAQSGHISAVGFEMYLSLLEEAIRDMKGEEVRPERAVTLSLGLDLTIPPAYVADENWRMMIYKKVARAKDDAGLEDTRREIADRFGEPPAALGRLIEYSRLRNRAERLGVTSVTRQAGRVHLRLAEDARVDGERLAALVRETSGAALSPGGLLSFPAPPAGELIAALLSWMNELERREAA*