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PLM4_65_b1_redo_sep16_scaffold_3198_7

Organism: PLM4_65_b1_sep16_Acidobacteria_68_17

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(5634..9821)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 1394.0
  • Bit_score: 1944
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3Y4_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 1394.0
  • Bit_score: 1944
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 1398.0
  • Bit_score: 1986
  • Evalue 0.0

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4188
GTGGACACAACCGCTTTCGCAGCGAAACCGACCACGCTGAAGGATTTCAACGCGATCAAGATCTCTCTGGCGTCGCCGGAGAAGATCCGGTCGTGGTCCTACGGCGAGGTCACCAAGCCGGAGACGATCAACTACCGGACGTTCAAGCCGGAGCGCGACGGTCTCTTCTGCGCGAAAATCTTCGGCCCGATCACGGACTGGGAGTGTCTCTGCGGCAAGTACAAGCGGATGAAGCACCGCGGCGTCGTGTGCGACAAGTGCGGCGTCGAGGTCACCAAGTCGAAGGTTCGCCGCGAGCGCATGGGACACATCGAGCTCGCGTCGCCGGTCTCTCACGTCTGGTTCTTCAAGGGGCTGCCGTCGCGGATCGGGCACCTGCTCGACATTTCGCTGCGCGATCTCGAGCGGATCCTCTACTTCGAGTCGTACGTCGTCATCGATCCGGGCGAGACCGACCTGAAGGAGAAGGAGCTGCTCTCGGAGGAGCGCTACCGCGCCGTCCGCGGGGAGCACGGAGACGTCTTCGTCGCCCGGATGGGCGCAGGCGCGATCAAGGAGCTCCTCCAGCGGGTCGACGTCGACATGCTGGCGGAAGAGCTCCGCATGATCATGAAAACCGAGACCTCCCAGATCAAGCGTCAGAAGGCGGCGAAGCGCCTCAAGGTCTGTGACGCGTTCCGCCGCTCGGGTCACCGACCGGACTGGATGATCTTGGACGTCATCCCGGTCATTCCGCCGGAGCTCCGTCCGCTCGTTCCTTTAGACGGCGGCCGGTTCGCGACGTCGGACTTGAACGACCTCTACCGGCGCGTCATCAACCGGAACAACCGGTTGAAGAAGCTCCTCGAGCTGCGCGCTCCGGAGGTCATCGTCCGCAACGAGAAGAGAATGCTCCAGGAAGCGGTCGACGCTCTCTTCGACAACGGCCGGCGTGGTCGGGTCCTGAAGGGCTCGAACAACCGTCCCCTGAAGTCGCTCTCCGACACCCTGAAGGGCAAGCAGGGGCGCTTCCGTCAGAACCTTCTCGGAAAGCGCGTCGACTACTCGGGCCGCTCGGTGGTCGTCGTCGGGCCGGAGCTGAAGCTTCACCAGGCCGGTCTGCCGAAGAAGATGGCGGTCGAGCTCTTCAAGCCGTTCATCTACAACCGGCTCGAGAAGAAGGGCATGGCCCAGACCATCAAGGCGGCCAAGGAGCTCGTCGAGTCCGGCGTCACGGAGGTCTGGGACGCTCTCGAGGAGGTCATCCGCGACCACCCCGTGCTCCTGAACCGCGCCCCGACGCTCCACCGGCTGGGCATCCAGGCGTTTCAGCCCGTTCTCGTCGAGGGCAAGGCGATCAAGATTCATCCGCTCGTCTGCCCGGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCGGTGCACGTGCCGCTCTCGCCGAAGGCGCAGGTCGAGGCGGAGCTCCTGATGCTCTCCTCGAACAACATCCTGTCGCCGGCGTCGGGCCGGCCTCTCGCCGTCCCGTCGCAAGACCTCGTGCTGGGGATCTACTACCTGACGAAGTCCCGCTCGAACACGAAGGGGGAGGGGCGCATCTTCTCCGACTTCGACGAGGTCGTGATCGCCTACGAGCAGGGGGACGTCACGACCCACACGCCGATCCGGGTTCGCTACTCCGGCCGGTACATCGACCTGACGACGCAGTACAACGACCAGGACATCGTGCACGCGGAGGTCCAGGACGTGGAAAGGACGCTGATCGACACGACGGTCGGCCGCGTCATCTTCAACCGCGCTCTCCCCGAGGTCGTTCCGTTCATCAACGGAAACCTCAAGAAGCGCGGACTGTCGGACTTCGTCAACTACGTGTACCTGACGTTCGGCGAGGAACTCTGCGTCCTCATGCTCGACGACCTGAAGGATCTCGGCTTCAACGCGGCGACCCGGGCGGGCATCTCGATCGGCGTCGACGACATGCTGGTGCCGCCGAAGAAGGAGGAATACCTTGCCGCCGCGCGGCGCGAGATCCTCGAGGTCGAGGGCCAGCGCAACTCCGGGGTCATCACCGCCGGTGAGCGCCACAACAAGATCATCGACATCTGGCATCGGACTACCGAGAACATCTCCGACGAGATGTTCCGGGAGATGAAGAAGTCCGACCAGGTCGGTCAGGAGTTCAACCCCATCTACATCATGGCGGACTCCGGCGCGCGAGGCTCCAAGGAGCAGGTCCGACAGCTCGCCGGAATGCGCGGGCTGATGTCGAAGCCCTCCGGCGAGGTCATCGAAACGCCGATCACCGCCAACTTCCGCGAGGGCCTGTCGGTGCTCCAGTACTTCATCTCCACCCACGGCGCCCGCAAGGGTCTCGCGGACACGGCCTTGAAGACGGCCGACTCGGGCTACCTGACGCGCCGCCTCGTGGACGTCGCGCAGGACGTCATCGTCATCGAAGAGGACTGCGGAACGAACGACGGCATCACCGTCACCGCGATCATGGAGGGGGGAGACACTCTCGAGCCGCTCCGCGACCGCATCGTCGGCCGCGTGGCGCAGGAGGACATCTACGATCCCCTGTCCGAAACGAAGCTCGCCACCCTGGGCGAGGAGATCACGGAAGAGCTCGCCTCCAGCGTGCAGGAGGCCGGTATCGAGCGGGTGAAGATCCGCTCGGTGCTGACCTGCGAAACCAAGCGCGGGATCTGCCGCCTCTGCTACGGCCGGATGCTCGCCTCCGGAAAGATGGTGGAGATCGGCGAGGCCTGCGGCGTCATCGCGGCGCAGTCGATCGGTGAGCCCGGCACCCAGCTCACGATGCGGACGTTCCACTACGGTGGTACCGCATCGCGCGTCACCGAACAGTCGAAGCACGCCGCGAAGAACCCCGGCACGGTCCGGTTCCTCTCGGTCTCGACCGTCCAGCGCAAGGACGGCAACCTGGTCGTCATCAACCGGAACGGCAAGATCACGATCATGGACAACAAGGGGCGTGAGAAGGAGCGGTACTCGGTCGTGTACGGCTCGACGATCAAGGTGTCCGACGGACAGGAGGTCGTCCCCGGCCAGGAGCTCGTCGAGTGGGATCCGTTCACGTCGGCGATCCTGACGGAGGTCGGCGGGACCGTCGCCTTCCGCGACATCGTCGAGGGGGAGAACCTCCGCGAGGAGACCGACCGCGTCACCGGACTCGCGCAGAACATCATCGTGGAGACGGTCGGAGCCGAGAAGCGCTCTCCCCAGGTACTCGTCCAGGGGAAGGGCACCGACAAGAAGTACCTGCTGCCGATCGGCTCGCACCTCATGGTGACCGACGGCCAGACGGTCTCGCCCGGCGACGTGCTCGCCAAGATCCCCCGCGAGACGACGAAGACGAAGGACATCACGGGCGGTCTTCCCCGCATCGTGGAGCTGTTCGAGGCGCGCCGCCCGAAGGACGCCGCGGTCATCACCGAAATCGACGGAACGGTGTCGCACGGCCCGATCGCCAAGGGCATGCGGAAGGTCATCATCACCGGAGACGACGGGGAGACCCGCGAGTACCTGATCCCCCGCTACACGCACGTCAACGTCCAGGAGGGGGAGCGGGTCCGCGCGGGTGATCCGCTGATCGACGGCCCGATCAACCCGCACGACATCCTCGCGATCCTGGGGGAAAAGGAGCTGCAGCGTTACCTCGTCGACAAGATCCAGGAGGTCTACCGCTCCCAGAACGTCGCGATCAACGACAAGCACATCGAGGTCATCGTCCGGCAGATGATGAGGAGCGTGAAGATCGAGGAGGTCGGCGACACCGACTTCCTGATCGACGAGCAGGTCGACCGCTTCCGGTTCGAAGAAGAGAACGAGCGCGTCATCACGGCCGGAGGCCAGTCGTCGATCGGGCGCCCGATGCTCCTCGGCATCACGAAGGCTTCGCTCTCGACCGACTCGTTCGTGTCGGCGGCCTCGTTCCAGGAGACGACCCGCGTCCTCACCGAGGCATCGATCTCCGGGAAGGTCGACAACCTGCGCGGCCTGAAGGAAAACGTCATCGTCGGACGTCTCATCCCGGCCGGTACGGGCATGGACTACTACCGCAACGTCGTCCTCGAGCGGGAAGAAATCCCGCAGGTCGAGGAGCCGGCGCTCGAAGATTTCCTGACCGATCCGGCCGAGGAGCTCGCGCTCGCGGAAGCGGACGCGGAGGTCGACGCGTCGGAAGAGGACTAA
PROTEIN sequence
Length: 1396
VDTTAFAAKPTTLKDFNAIKISLASPEKIRSWSYGEVTKPETINYRTFKPERDGLFCAKIFGPITDWECLCGKYKRMKHRGVVCDKCGVEVTKSKVRRERMGHIELASPVSHVWFFKGLPSRIGHLLDISLRDLERILYFESYVVIDPGETDLKEKELLSEERYRAVRGEHGDVFVARMGAGAIKELLQRVDVDMLAEELRMIMKTETSQIKRQKAAKRLKVCDAFRRSGHRPDWMILDVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLLELRAPEVIVRNEKRMLQEAVDALFDNGRRGRVLKGSNNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVVVVGPELKLHQAGLPKKMAVELFKPFIYNRLEKKGMAQTIKAAKELVESGVTEVWDALEEVIRDHPVLLNRAPTLHRLGIQAFQPVLVEGKAIKIHPLVCPAFNADFDGDQMAVHVPLSPKAQVEAELLMLSSNNILSPASGRPLAVPSQDLVLGIYYLTKSRSNTKGEGRIFSDFDEVVIAYEQGDVTTHTPIRVRYSGRYIDLTTQYNDQDIVHAEVQDVERTLIDTTVGRVIFNRALPEVVPFINGNLKKRGLSDFVNYVYLTFGEELCVLMLDDLKDLGFNAATRAGISIGVDDMLVPPKKEEYLAAARREILEVEGQRNSGVITAGERHNKIIDIWHRTTENISDEMFREMKKSDQVGQEFNPIYIMADSGARGSKEQVRQLAGMRGLMSKPSGEVIETPITANFREGLSVLQYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVIEEDCGTNDGITVTAIMEGGDTLEPLRDRIVGRVAQEDIYDPLSETKLATLGEEITEELASSVQEAGIERVKIRSVLTCETKRGICRLCYGRMLASGKMVEIGEACGVIAAQSIGEPGTQLTMRTFHYGGTASRVTEQSKHAAKNPGTVRFLSVSTVQRKDGNLVVINRNGKITIMDNKGREKERYSVVYGSTIKVSDGQEVVPGQELVEWDPFTSAILTEVGGTVAFRDIVEGENLREETDRVTGLAQNIIVETVGAEKRSPQVLVQGKGTDKKYLLPIGSHLMVTDGQTVSPGDVLAKIPRETTKTKDITGGLPRIVELFEARRPKDAAVITEIDGTVSHGPIAKGMRKVIITGDDGETREYLIPRYTHVNVQEGERVRAGDPLIDGPINPHDILAILGEKELQRYLVDKIQEVYRSQNVAINDKHIEVIVRQMMRSVKIEEVGDTDFLIDEQVDRFRFEEENERVITAGGQSSIGRPMLLGITKASLSTDSFVSAASFQETTRVLTEASISGKVDNLRGLKENVIVGRLIPAGTGMDYYRNVVLEREEIPQVEEPALEDFLTDPAEELALAEADAEVDASEED*