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PLM4_65_b1_redo_sep16_scaffold_6074

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6074_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
Amidohydrolase (Fragment) Tax=Rhizobium sp. CF080 RepID=J2TEI4_9RHIZ
putative amidohydrolase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
PLM4_65_b1_redo_sep16_scaffold_6074_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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511..915
DNA (405bp) protein (135aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000376F23B
glyoxalase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_6074_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1043..2533)
DNA (1491bp) protein (497aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6074_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2572..3720)
DNA (1149bp) protein (383aa)
Spermidine/putrescine ABC transporter ATPase subunit bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter ATP-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6074_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3788..5398)
DNA (1611bp) protein (537aa)
hypothetical protein Tax=Pseudomonas agarici RepID=UPI00037029A0
binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6074_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5511..6326)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Bacillus fordii RepID=UPI00037AA3E7
nitrate transporter protein CmpC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6074_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6539..7258
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6074_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7295..8665
DNA (1371bp) protein (457aa)
dihydroorotase (EC:3.5.2.3)
Allantoinase Tax=Halomonas sp. HAL1 RepID=G4F3F5_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6074_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8738..9646
DNA (909bp) protein (303aa)
Carbon monoxide dehydrogenase medium chain bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carbon monoxide dehydrogenase medium chain
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6074_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9755..10234
DNA (480bp) protein (160aa)
carbon-monoxide dehydrogenase (acceptor) bin=GWD2_Deltaproteobacteria_55_8 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6074_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10296..12611
DNA (2316bp) protein (772aa)
Oxidoreductase molybdopterin binding subunit bin=GWD2_Deltaproteobacteria_55_8 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
oxidoreductase molybdopterin binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 11 items

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