ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3325_15

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(11653..12033)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter substrate-binding protein Tax=Afipia birgiae RepID=UPI0002F1F0A3 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 112.0
  • Bit_score: 119
  • Evalue 1.40e-24
ABC-transporter similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 97.0
  • Bit_score: 119
  • Evalue 3.90e-25
Putativ ABC-transporter {ECO:0000313|EMBL:CAI09141.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 97.0
  • Bit_score: 119
  • Evalue 1.90e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aromatoleum aromaticum → Aromatoleum → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACGGATACCATTCTGGAAGTGCGGGCGTTGAGCAAATACTTCGGCGGTCTCGCCGCCGTCGACCATGTTTCGCTGGAAGTCGGAGTCGGTAAGCTGCACGCGGTTATCGGCCCCAACGGCGCCGGTAAGACAACGCTGGTCAACATGCTGTCCGGCGATCTGTTGCCAACCTCTGGCAGTGTATGCTTTCGCGGCCAAGACATCTCGCGGCTCGCGCCCGAGAAACGCTCTCGCCTGGGCATCGGCCGCAGCTATCAGAAGACCAATATTCCCCCCCCGGCTTCAGCGCGCTGGAAAACTGCCGCCTGGCGGCACAGTCGCGCCAGCCTCATCCTCTCAACTGGCTGCGTGCCGCGCTTTCGTACGGGGACATCGTAA
PROTEIN sequence
Length: 127
MTDTILEVRALSKYFGGLAAVDHVSLEVGVGKLHAVIGPNGAGKTTLVNMLSGDLLPTSGSVCFRGQDISRLAPEKRSRLGIGRSYQKTNIPPPASARWKTAAWRHSRASLILSTGCVPRFRTGTS*