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PLM4_65_b1_redo_sep16_scaffold_8536

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8536_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1..558
-----------------
DNA (558bp)
protein (186aa)
Exporter of the RND superfamily protein-like protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSY1_CHLT3
Uncharacterized protein {ECO:0000313|EMBL:KDA54846.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
exporter of the RND superfamily protein-like protein
PLM4_65_b1_redo_sep16_scaffold_8536_2
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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comp(572..1231)
-----------------
DNA (660bp)
protein (220aa)
Rhomboid family protein Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GDQ2_SPITZ
rhomboid family protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
PLM4_65_b1_redo_sep16_scaffold_8536_3
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

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comp(1228..2697)
-----------------
DNA (1470bp)
protein (490aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000380423F
pyk; pyruvate kinase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_b1_redo_sep16_scaffold_8536_4
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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2867..3064
-----------------
DNA (198bp)
protein (66aa)
Peptidoglycan-binding domain 1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR77_9DELT
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:EAT04214.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8536_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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3170..3394
-----------------
DNA (225bp)
protein (75aa)
id=2914529 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_8536_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3391..3810
-----------------
DNA (420bp)
protein (140aa)
putative plasmid stability-like protein bin=GWC2_Methylomirabilis_70_16 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
plasmid stability protein stbB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_8536_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4066..4986
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EXL3_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK04416.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM4_65_b1_redo_sep16_scaffold_8536_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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4991..6328
-----------------
DNA (1338bp)
protein (446aa)
Signal recognition particle protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJE2_THEM7
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_8536_9
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6362..7660)
-----------------
DNA (1299bp)
protein (433aa)
Putative uncharacterized protein Tax=Oscillatoria sp. PCC 6506 RepID=D8G8K3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58943.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
FkbM family methyltransferase
PLM4_65_b1_redo_sep16_scaffold_8536_10
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7674..7925)
-----------------
DNA (252bp)
protein (84aa)
Methyltransferase FkbM family Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VDI7_9CYAN
methyltransferase FkbM family
Methyltransferase FkbM family {ECO:0000313|EMBL:AFZ05325.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM4_65_b1_redo_sep16_scaffold_8536_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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8198..8434
-----------------
DNA (237bp)
protein (79aa)
30S ribosomal protein S16 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=RS16_THEYD
rpsP; 30S ribosomal protein S16
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_8536_12
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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8436..8675
-----------------
DNA (240bp)
protein (80aa)
UPF0109 protein C811_00798 Tax=Enterorhabdus caecimuris B7 RepID=R9KXZ3_9ACTN
UPF0109 protein C811_00798 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8536_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8650..9309
-----------------
DNA (660bp)
protein (220aa)
Ribosome maturation factor RimM Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1H9_PSEUX
ribosome maturation factor rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM4_65_b1_redo_sep16_scaffold_8536_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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9291..10037
-----------------
DNA (747bp)
protein (249aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_65_b1_redo_sep16_scaffold_8536_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10113..10481
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L19 Tax=Sporichthya polymorpha RepID=UPI0003612AC5
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_8536_16
unknown

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10534..10668
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

Displaying 16 items

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