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PLM4_65_b1_redo_sep16_scaffold_1306_6

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: 5914..6510

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 192.0
  • Bit_score: 193
  • Evalue 3.40e-47
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG89267.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 192.0
  • Bit_score: 193
  • Evalue 1.70e-46
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 191.0
  • Bit_score: 146
  • Evalue 2.20e-32

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGTCGACGATCAACGAGTTGGTTGTGGCGGCGGACGGCGGCGACGGCGTAGCCGCCAAGACGCTGTTCGCGACGCTGTACCACGAGCTCCACACGCTGGCGGAGCATCACCTCCAGCGCCGTGGATCGCAGCTGACCCTCGGGACCACCACCCTGCTCCACGGATCGCAGCTGACCCTCGGGACCACCACCCTGCTCCACGAGGCCTATCTCAAGCTGTCGGAGCGCGACGGCGCGCGGTTCCCCGATCGCGGCCGGTTCCTGGCATATGCGTCCAAGGCCATGCGCGGGCTGGTGATCGATTACGCCCGCGCGCGCCGGGCCAAGAAGCGCGGTGGAGAGTTCGAGATCACCCGCCTGGGAAACGATGAGCCCGCGGGCGCTCCCTTGCCCGACGAGACGCTCGAGCGGCTGGGCGAGGCCATGGAGCAGCTGGGGGAGATAGACCCGCCACTCGCGCAGCTGGTGGATCTGCACTTCTTCGCCGGGTTCTCGTTCGTCGAGATCGCCGCGCTGGAGGGGTCGTCAGAGCGGACGGTGCAGCGCAACTGGCAGAAGGCGCGGACGCTGCTGCGCCGCCTGGTCGAGGCCGCGTGA
PROTEIN sequence
Length: 199
MSTINELVVAADGGDGVAAKTLFATLYHELHTLAEHHLQRRGSQLTLGTTTLLHGSQLTLGTTTLLHEAYLKLSERDGARFPDRGRFLAYASKAMRGLVIDYARARRAKKRGGEFEITRLGNDEPAGAPLPDETLERLGEAMEQLGEIDPPLAQLVDLHFFAGFSFVEIAALEGSSERTVQRNWQKARTLLRRLVEAA*