ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_2154_16

Organism: PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: 15465..16295

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease Tax=Variovorax paradoxus RepID=UPI0003822021 similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 243.0
  • Bit_score: 255
  • Evalue 3.50e-65
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 243.0
  • Bit_score: 254
  • Evalue 2.20e-65
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38130.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 243.0
  • Bit_score: 254
  • Evalue 1.10e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGATTGCGCCAGACGAGAGGCGCTCGCTGAAACCGCCGCCCAAACCGTGGCGCGCGCGGGTGAGGGGTGTTTGGGAGCCGCTCGTCTCGATATCCGCGATTATCGTGCTGTGGCAGCTGGCGATTTCGCTACTCGGCGCACCGGGCTTCCTTCTGCCGACGCCGCTCGGCGTTCTCGAGCGGATGCAGAAAGACGCCGGCCTTCTGCTCTTCCACTCGGCCTCGACCACGTTCGTCACGCTGGGCGCTTTCGGCGTGTCCGTCGTTTTCGGTCTCGCGGCGGCGGTGGCGATCAGCCAGTCGCGCACCGTCGAGCGCTTCGTGCTGCCGCTGATGGTTTTCTCGCAAGTGGTGCCGAAGATCGCGGTGGCGCCGATCCTCATCATCGCGCTCGGCTTCAGCGCCAAAGCGCATATCATCGTGGCATTCCTGGTTTGCTTCTTTCCGATCCTGATAAGCACCGTCATCGGGATCAAATCGGTGGATGCCGAGTTGATCGATCTGACCCGCCAGCTCCGGGCGGGCCGCCTGCAGACACTCGGTATGGTCGTTCTGCCCCATGCGTTGCCGCACATCTTCTCGGGGCTCAAGGTGGCGATCACCCTGGCGATCGTCGGCGCGATCGTCGCGGAATGGGTGGGGTCGGATCGCGGATTGGGCTATCTGCTGCTCGTCGCCAACGGCAACTTCGACATTACGCTCGTGTTCGCGGTGCTGGTCGTGCTCACGCTCTTGGGGGTCGTGCTGTTTCTGCTGCTCGACCTGGCCGAGCGGCTATTGCTGCCCTGGCACGTCTCCCGCCGCATCGGCCTGCAGCAGCCCATGCAATGA
PROTEIN sequence
Length: 277
MIAPDERRSLKPPPKPWRARVRGVWEPLVSISAIIVLWQLAISLLGAPGFLLPTPLGVLERMQKDAGLLLFHSASTTFVTLGAFGVSVVFGLAAAVAISQSRTVERFVLPLMVFSQVVPKIAVAPILIIALGFSAKAHIIVAFLVCFFPILISTVIGIKSVDAELIDLTRQLRAGRLQTLGMVVLPHALPHIFSGLKVAITLAIVGAIVAEWVGSDRGLGYLLLVANGNFDITLVFAVLVVLTLLGVVLFLLLDLAERLLLPWHVSRRIGLQQPMQ*