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PLM4_65_b1_redo_sep16_scaffold_1579_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(1..1446)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 475.0
  • Bit_score: 462
  • Evalue 3.30e-127
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 418.0
  • Bit_score: 156
  • Evalue 1.90e-35
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 484.0
  • Bit_score: 461
  • Evalue 1.00e-126

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGAATAGGCTGTTCGCACTGGCGAGCGCTCTCGTGCTGCTGGCGCTGCCAGCGTTCTCCCAGACCAACCCCACCGGCTCCATCTCCGGGAAGATCGTCGACCAGCAGAGCCTGGCCGTTCCCGGCGCCATCGTGACGGTCCAATCCCCGGCCCTGCAGGGAACGCGCTCGGCGACGAGCTCGGTCAATGGCGACTACATCATTCCCTTCCTGCCCCCCGGCGACTACAGCGTGACCGTGGAAATGTCGGGGTTCGGCACGGTCAAGAGCCCGGCCCGCGTGGCGATCGGCCAGACGGCCACCATCGATTTCTCGCTCGCCTTGTCGACCTTGACCGAGACTCTCGAGGTCACGGCGGAGACGACCGCCGACTTCGGCCAGAAGGCGCAGGTGTCGACCAACTTCAAGCAGGAGCTGATCGAGAAGCTGCCGCTCGGCCGGACCTTCCAGGCCGCGGCGCTGCTGACCCCGGGCGTGCAGAACACCGGCCCGCAGGGCGCGCTCGCCATCTCCGGTGCGATGTCGTACCAGAACCTGTTCATGATCAACGGCGTGACGGTGCAGGACAACATCCGCAGCACGCCGTTCAACCTCTTCATCGAGGACGCGCTGCAGGAGACGACCACCACGACGGCCGCGGTCTCGGCCGAGTTTGGGCGCTTCGGCGGCGGCGTCGTCAACGCGATCACCAAGTCCGGGGGCAACGAGTTCAGCGGGTCGTTCCGGCTGACCTTCGAGAACGACGACTGGACCGCCCTCACCCCCTACACGGGCGACAAGCGCTCGGACGACGTCATCCCCACCTATGAGGCGACGCTCGGCGGGCCGATCCTCAAGGACAAGCTCTGGTTCTTCGGCGCGACGCGCCTGCGGGACTTCAGCGAGGCCCGCCAGACCACGACGACGCTCATCGACTACGGCCGTCAGCTGAACGAGAAGCGCTACGAAGGCAAGCTCACCTTCTCCCCTACCACGAAGCACACCTTCAAGGGCGCCTACAGCTGGATCGACTCCACGGAGAACGGCAACTCCTTCGGGAACATCATGGACGAGGCGAGCCTGGTCAACAGGACGCTGCCCCAGAGGCTGCTCTCGCTGAACTACACGGGGATCGTGAGCTCGAACTTCTTCGTCGAGGCGCAGTACTCCAGCCGATCGTTCAAGTTCGAGAACTCGGGCTCGCAGTTCACCGACCTCATCAAGGGAACGCTGCTGCTCGACCAGTCGCGCGGAACCAACCGCTACAACTCGCCGACTTTCTGTGGCGTGTGCGGGCCGGAAGGCCGCGACAACCAGAACGTGGTCCTAAAGGCCTCCTACTTCCTGTCCACCGCGAGCGCCGGATCCCACAACTTCGTGGGCGGCGTCGACATGTTCGACGACAAGCGCAAGGTCAACAACCACCAGTCGGGCAGCGACTACCGGGTCTACTCCACCTCGGCGATC
PROTEIN sequence
Length: 482
MNRLFALASALVLLALPAFSQTNPTGSISGKIVDQQSLAVPGAIVTVQSPALQGTRSATSSVNGDYIIPFLPPGDYSVTVEMSGFGTVKSPARVAIGQTATIDFSLALSTLTETLEVTAETTADFGQKAQVSTNFKQELIEKLPLGRTFQAAALLTPGVQNTGPQGALAISGAMSYQNLFMINGVTVQDNIRSTPFNLFIEDALQETTTTTAAVSAEFGRFGGGVVNAITKSGGNEFSGSFRLTFENDDWTALTPYTGDKRSDDVIPTYEATLGGPILKDKLWFFGATRLRDFSEARQTTTTLIDYGRQLNEKRYEGKLTFSPTTKHTFKGAYSWIDSTENGNSFGNIMDEASLVNRTLPQRLLSLNYTGIVSSNFFVEAQYSSRSFKFENSGSQFTDLIKGTLLLDQSRGTNRYNSPTFCGVCGPEGRDNQNVVLKASYFLSTASAGSHNFVGGVDMFDDKRKVNNHQSGSDYRVYSTSAI