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PLM4_65_b1_redo_sep16_scaffold_2767_12

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(12197..12901)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 202.0
  • Bit_score: 199
  • Evalue 2.60e-48
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 200.0
  • Bit_score: 160
  • Evalue 3.70e-37
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 214.0
  • Bit_score: 337
  • Evalue 1.10e-89

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Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 705
TTGACCCGCGCGCGCACGAGCCCCTATGATCGTGAGTCTGGCGGTCGTCTGTGGGATGCGGCACGCGCCGCGGGAATCGAGCCTTTGGACGAGGGGAAGCTCGCCCCTTCGGACGCGGAGCTCATCGAGCGCTGCCTCCGCAAGGACAATGCGGCGTGGGAGCTGGTGGTCGCTCGTTACAGGCGCAAGGTGTTCCACATCGCCTACAAGTTCACCGGCAAGCACGACGAGGCCGAGGACCTGCAGCAGGAGATCTTCCTCAAGGTCTTCCGGGCGCTCGACAAGTTCCATCGTGACGCCGACTTCTCGACCTGGCTGTCGAGCGTCGCGCGCAACTACTGCATCGATCACTACCGCGCCAGCAAACGCGAGAAAGAAGTCCTGGTCGAGGACGCGCTCGCTTACGACCTGGCTCCCGCCGCCTCGGGGAATCCCTACCGCGCGCTCGAGGACAAGGACCGAAGCAGCCTGGTGCGCCGCGGGCTCGACCAGCTGCCAGGGAAGCTGCGCGAGGCGGTGATCCTGCGCGACCTGCAGGGGTTGAGCTACCAGGAGATGGCGCTGCGGCTCGCCCTCCCCGAGGGCACGGTCAAGAGCCGCATCAACCGGGGTCGCGAGGAGCTCGCGCGGCTGCTGCTTCGCGCCCAGCAGCCGCTGCGGCGGATCGCGGCGTCGCGAAACACGAGGCGGCGGGAGGTGAGGTGA
PROTEIN sequence
Length: 235
LTRARTSPYDRESGGRLWDAARAAGIEPLDEGKLAPSDAELIERCLRKDNAAWELVVARYRRKVFHIAYKFTGKHDEAEDLQQEIFLKVFRALDKFHRDADFSTWLSSVARNYCIDHYRASKREKEVLVEDALAYDLAPAASGNPYRALEDKDRSSLVRRGLDQLPGKLREAVILRDLQGLSYQEMALRLALPEGTVKSRINRGREELARLLLRAQQPLRRIAASRNTRRREVR*