ggKbase home page

PLM3-1_170_b1_sep16_scaffold_5850_17

Organism: PLM6_170_b1_sep16_Thaumarchaeota_37_7

near complete RP 29 / 55 MC: 3 BSCG 14 / 51 ASCG 31 / 38 MC: 1
Location: 10995..12755

Top 3 Functional Annotations

Value Algorithm Source
Probable translation initiation factor IF-2 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYZ2_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 586.0
  • Bit_score: 922
  • Evalue 1.90e-265
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_80_D11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 586.0
  • Bit_score: 923
  • Evalue 1.20e-265
infB; translation initiation factor aIF-2 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 586.0
  • Bit_score: 914
  • Evalue 8.40e-264

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured marine thaumarchaeote AD1000_80_D11 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1761
GTGGCCGTATTAGGTCATGTAGATTCTGGTAAGACATCATTACTTGATAAAATCAGGGGAACTGGAGTTCAAGAAAGAGAAGCAGGCGGCATTACACAACACATTGGTGCAAGCTTTCTTCCAGATGAGACCATAAAGAAAATTTGTGGCCCGATTTATGAAAAGATGAGCAAGGTAGAAACAAAGATTCCTGGAATTTTAGTAATTGATACACCTGGACACGAGGTGTTTACAAACCTGCGCGTTCGAGGTGGTTCTGCAGCAGACATCGCAATCCTTGTTGTGGACATTAACCGTGGATTCCAGCCACAAACAAACGAAAGCCTAAAGATCCTAGAAAGTAGAAAAGTTCCCTTTGTTATAGCGCTAAACAAAACTGATATGCTTTCTGGATGGAAAAAAACCGATACTCCGTTTATATCGCAGGCTATCAAGGAACAAAGCCCGTCCATTCAAACAATGCTTGATGAACAGATCTATAATGTAGTTGGAACACTTTCAGTTTTAGGATATCAATCTGAGGCATTTTATCGTGTAAAGGACTTCAAACAGGAAGTAGCTATTGTTCCAGTCAGTGCACGAACTGGTGTTGGAATTCCAGAACTTTTGGCAGTTCTAGTTGGTCTGACACAACAATATCTAAAGAAAAAACTAGATCAGGAGGAAAAAACCAGTCGCGGAATTATTCTTGAAGTAAATGACGACGTAGGTCTTGGTGCAACTGCAAACATGATCCTAATTGACGGTTATATGACAAAAGAGAACATCATTGTAGTTGCAAAAAGAGACTCTGTTATCACAACAAAACCAAAGGCCATACTTCTTCCAAAACCACTTGATGAGATGCGTGATCCGCGAGACAAATTCAAACCAGTAAATGAGGTGCAAGCGGCTGCTGGCATCAAAATCGCATCACCTGACCTAGAAGGCGTACTCCCAGGAAGTACCGTTTATGTTGCAAAATCAGAGGAAGAAGCATCAGAATTTAAGAAACTAATCGAGGCTGAAATGAAATCAGTTTTCATAGATACACAATCAAACGGTATCATCTTAAAATGTGATACAATTGGTTCACTTGAGGCAGTAACTGAGATGCTAAAACGCATACAGGTACCAATAGCAAAAGGTGACATTGGACCTTTAAACCGGCGTGATGTCATAGAAGCAAAGGCAATAAAAGAAAACGACAGACACTTAGGCGTTGTTTTAGCATTTAATGTAAAAGTAATACAAGAGGCACAACAGGAAGCCGACGATCACCACATCAAAATATTTACTGACAAAGTAATCTACAGCTTAATTGACAACTATACTGCATGGGTTGATGAAGACAAGCTGCATGAAGAGGACGCAATATTCTCTGAGCTTACACCAGTTGCCAAGTTCACATTTCTAAAAGGATATATCTTTAGAAACAACGATCCTGCAGTGTTTGGAATTAGAGTAGATGTTGGAACACTTCGACAAAAGGTACAGTTTATGAACAAAAATGGAAAAAGAATCGGTATTATCCATCAGCTTCAAGAAGATAAAAAAACAGTAAACTTTGTAAAGGCTGGCACAGAAGTTGCATGCTCAGTACAAGGTGTTACAATTGGAAGACAAATACACGAAGAAGACATTTTTTATACCCTTCCGCCATCACATGAGGCAAAACAACTATTGAAGAAATTTGCACACAAACTTTCTTCTGAAGAGATTGCAATACTAAACGATATAGTGGCAATTCAACGCAAAATAGATCCTGCATACGCATACTAA
PROTEIN sequence
Length: 587
VAVLGHVDSGKTSLLDKIRGTGVQEREAGGITQHIGASFLPDETIKKICGPIYEKMSKVETKIPGILVIDTPGHEVFTNLRVRGGSAADIAILVVDINRGFQPQTNESLKILESRKVPFVIALNKTDMLSGWKKTDTPFISQAIKEQSPSIQTMLDEQIYNVVGTLSVLGYQSEAFYRVKDFKQEVAIVPVSARTGVGIPELLAVLVGLTQQYLKKKLDQEEKTSRGIILEVNDDVGLGATANMILIDGYMTKENIIVVAKRDSVITTKPKAILLPKPLDEMRDPRDKFKPVNEVQAAAGIKIASPDLEGVLPGSTVYVAKSEEEASEFKKLIEAEMKSVFIDTQSNGIILKCDTIGSLEAVTEMLKRIQVPIAKGDIGPLNRRDVIEAKAIKENDRHLGVVLAFNVKVIQEAQQEADDHHIKIFTDKVIYSLIDNYTAWVDEDKLHEEDAIFSELTPVAKFTFLKGYIFRNNDPAVFGIRVDVGTLRQKVQFMNKNGKRIGIIHQLQEDKKTVNFVKAGTEVACSVQGVTIGRQIHEEDIFYTLPPSHEAKQLLKKFAHKLSSEEIAILNDIVAIQRKIDPAYAY*