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PLM1_60_b1_redo_sep16_scaffold_320_11

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: 9071..9379

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase Rpb4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJP5_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 93.0
  • Bit_score: 135
  • Evalue 2.60e-29
rpb4; RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 93.0
  • Bit_score: 135
  • Evalue 7.30e-30
Putative RNA polymerase Rpb4 {ECO:0000313|EMBL:AFU59443.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 93.0
  • Bit_score: 135
  • Evalue 3.60e-29

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 309
ATGATTACACTCCCCGATGTCAAGGAGATACTGGAAACCAGGAAGGTTGACGAGATGGATCAAATTCAGAGATGGACCTATGATTATGTGAATAAGTTCTCAAAAATAACTAGTAAGCAGGCACAAAAACTTGTTGGTGAATTGGTAAGTCAATGTGGTCTTACTGAAGAAGAGGCAGTAGAAGTGGTGAGTATTTTGCCTTCTTCTTTAGAGGAAATTAGGTCTTTTACGTTTGGTTGGAAAAAATTAATACTAACATCAACCTCAGAAAGCATATTACAAAAAATTACGTCGGTACATGAAACTTAA
PROTEIN sequence
Length: 103
MITLPDVKEILETRKVDEMDQIQRWTYDYVNKFSKITSKQAQKLVGELVSQCGLTEEEAVEVVSILPSSLEEIRSFTFGWKKLILTSTSESILQKITSVHET*