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PLM1_60_b1_redo_sep16_scaffold_340_27

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 30789..32054

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinomadura flavalba RepID=UPI0003798279 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 406.0
  • Bit_score: 425
  • Evalue 5.10e-116
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 410.0
  • Bit_score: 423
  • Evalue 5.50e-116
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB75668.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 410.0
  • Bit_score: 423
  • Evalue 2.70e-115

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
GTGTCCAACGACCCGGCCGCGGCGCTCGCCGCAACGCACCGCGAGGACTGGGGACGGCTGCTCGCGCTGCTCGCCCGCCAGTTGCGCGACCTCGACCTGGCCGAGGAGGCGCTGGCCGACGCGTTCGCCAGGGCCGTCGCCCGATGGCCCGAGGACGGCGTCCCCGACCGCCGCGCCGCCTGGCTGCTCACCACCGCCCGGCGGTGCGCGCTGGACACCCTGCGCCGCCGCGCGACGCTGGCCCGCAAGCTGCCGCTGCTGATCACCGACGCCGAGCCGGACGGTGACCCGCTCATCGACAACGAGGAGGAGGTCGTGACGACGATCCCCGACGAACGACTGCGAGTCCTCTTCACCTGCTGCCACCCCGCGCTGGAGGCGCCCGCGCGCGTCGCACTGACCCTGCGCTTGCTCGGCGGGCTCTCGACAGCGGAGATCGCCCGAGCATTCCTCGTCTCCGAACCGACAATGGCGGCCAGGATCACCCGGGCGAAGAAGAAGATCGCGCTCGCCGGTATCCCGTACCGCGTGCCGACCGACGCCGAGCTGCCGGACCGGCTGGCCGGCGTCCTCGCGGTGCTTTACCTGGTCTTCAACGAAGGCTACGCGGCGAGCGCCGGTGCGGAGCCGATCCGGCGTGAGCTGTGCGCGGAGGCGATCCGGCTGAGCCGCGTCGTGGTCACGCACCTGCCGGACGAGCCCGAAGCCCTCGCGCTGCTCGCGCTCCTGCTGCTGCAACATTCCCGGCGCGATGCCCGCCTCGACGCCGCCGGCCGGGTCGTGCTGCTGCCCGCGCAGGACCGCGAGCGGTGGCGCGCCGACGAGATCGACGAAGGCATCGCGCTGATCCGGCAGGCGGCGCGGCGGCAGCCACCCGGTGCGTACCTCCTCCAGGCGGCGATCGCCGCCCAGCACGCCTCCGCTGCGCGCGCCGAGGAGACGGACTGGGCCGAGATCGCCCGGCTCTACGCCGCGCTGGACTCGCGCACCGCGTCGCCAGTGGTCCGGCTGAACCGGGCGGTCGCCGTCGCCGAGGTGGACGGGCCGGCCGCCGGCCTCGCGCTGCTGGCCGGCCTCGACGAGGCGCTGCCGCAGTACCACCTGCTGCCATCGGTCCGCGGCGACCTGCTGCGCCGGTTGGGCCGGTATCGCGAGTCGATCGCCGCGTACGACGTCGCGCTGTCACTGGCCGGCAACGCCGCCGACCTGGCGTTTCTGGCGGCTCGCCGGGCGGAGGTGGCGGCGCTCCTGAACGGCCGTGACTGA
PROTEIN sequence
Length: 422
VSNDPAAALAATHREDWGRLLALLARQLRDLDLAEEALADAFARAVARWPEDGVPDRRAAWLLTTARRCALDTLRRRATLARKLPLLITDAEPDGDPLIDNEEEVVTTIPDERLRVLFTCCHPALEAPARVALTLRLLGGLSTAEIARAFLVSEPTMAARITRAKKKIALAGIPYRVPTDAELPDRLAGVLAVLYLVFNEGYAASAGAEPIRRELCAEAIRLSRVVVTHLPDEPEALALLALLLLQHSRRDARLDAAGRVVLLPAQDRERWRADEIDEGIALIRQAARRQPPGAYLLQAAIAAQHASAARAEETDWAEIARLYAALDSRTASPVVRLNRAVAVAEVDGPAAGLALLAGLDEALPQYHLLPSVRGDLLRRLGRYRESIAAYDVALSLAGNAADLAFLAARRAEVAALLNGRD*