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PLM1_60_b1_redo_sep16_scaffold_352_18

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(17232..17750)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q4B2_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 170.0
  • Bit_score: 147
  • Evalue 8.50e-33
Uncharacterized protein {ECO:0000313|EMBL:KJY34871.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 181.0
  • Bit_score: 166
  • Evalue 3.20e-38
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 170.0
  • Bit_score: 147
  • Evalue 2.40e-33

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Taxonomy

Streptomyces sp. NRRL S-495 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGGATGCTGACGCCGAACGTGAGTTCCACGACTTCGTCGCGGGGTCGTCACGCCGGCTCGCTCAGTTCGCCACGCTGCTCATCAGTGACCGGCATACCGCCGAGGACCTTGTGCAGGCCGCGCTGGTCAAGGCGTACCTGAACTGGCCGAGCGCGCGGGACAATCCGCTGCCCTACGTCCGCCGGGTCATGCTCAACCAGCGGACCGACTGGTGGCGGCGGCTCCGCGGGCGTGAGCACGTCACCGCCGAGCTGCCGGACGCACCTGCGTTCGGTGACCTCGCCGACGCCCAGGCCAGCCAGGACGCCGTGGTCAAGGCGTTACGGGGGCTGACCGCCCGGGAGCGTGCGGTGGTGGTGCTCCGGTACTTCGAGGATCTCACCGAAGCCCAGATCGCCGCCGAACTCGGCATCGCGGTGGGCACCGTGAAGAGCACGCTGTTCCGCGCACTCGGCAAGCTGCGCGTCTCGCCGGATCTCGTTCCGATCGGCGTGGCGGAGATGGAGATTGCAGGATGA
PROTEIN sequence
Length: 173
VDADAEREFHDFVAGSSRRLAQFATLLISDRHTAEDLVQAALVKAYLNWPSARDNPLPYVRRVMLNQRTDWWRRLRGREHVTAELPDAPAFGDLADAQASQDAVVKALRGLTARERAVVVLRYFEDLTEAQIAAELGIAVGTVKSTLFRALGKLRVSPDLVPIGVAEMEIAG*